Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2386 ATGGCAGCTGGTGGAGGAGGAGGAAAGGCTGATGAATTCCTACCTCATCCTGTCAAGGACCAACTTCCGGGTGTTGATTACTGTGTTACCAGTTCTCCCTCATGGCCTGAAGGGATCATTCTTGGGTTTCAGCATTATCTGGTTGTGCTTGGGACCATTGTCATTGTTTCCACCATCCTCGTCCCTTTGATCGGTGGTGGCAATGTAGAAAAGGCCGAAACAATACAGACTCTACTTTTTATTGCTGCCATTAACACACTGCTGCAGACGTTGTTTGGCACACGGCTTCCAGTGGTTGTGGGACCATCCTATTCTTTTCTAATTCCTGCTGTTTCCATTGCTTTTTCCACCAGAATGAGTGTATATGCTGATCCACATCAGAGATTTAAACAATCTATGAGAGCCATACAAGGAGCACTTATTGTTGCATCGTTTTTTCAAATATTCGTTGGCTTTTTCGGCTTTTGGAGGATATTTGCCAGGTTTCTCAGCCCGCTTAGTGTGGCCCCTCTTGTCACTTTGACTGGACTAGGACTCTTTATGTTAGGATTTCCCAAATTGGCAGATTGTGTTGAAATTGGTCTCCCTGCATTACTTATCATTATCATCTTGTCCCAGTACATTCCGCAAAGGATGAAATCAAGAGGAGCTGATAGATTTGCAGTTATGGTCTCAATTGGAATTGCATGGGCATTTGCTGAAATTTTGACTGCAGCTGGTGCCTACAATAAAAGATCGCCTAGAACCCAATTAAGTTGCCGTACTGATCGATCTGGGTTAATTAGTGCTGCTCCTTGGATAAGAGTTCCATATCCATTTCAATGGGNACGCCCTTCTTTCAATGCTGGTGATGCTTTTGCTGTGATTGCTGCTTCTCTTGTTGCAATCGTAGAGTCAACAGGGACATTCATTGCAGCATCAAGATTTGGCAGTGCAACCCCTGTTCCACCTTCTGTGCTCAGTCGTGGTGTTGGCTGGCTGGGCATTGGCACTCTTTTGGATGGCCTTTTTGGCACAGGAACTGGATCCACTGCATCAGTTGAAAATGCAGGACTCCTGGGTTTAACACGAGTAGGAAGCCGCAGAGTCATTCAAATATCAGCTGGATTCATGTTTTTCTTCTCTATATTAGGAAAATTTGGAGCAGTTCTTGCTTCAATACCTCTGTCAATTATAGCAGCTATTTACTGCGTTCTCTTTGCCTACGTAGCCTCAGCTGGGCTTGGTTTTCTTCAATTTTGCAACCTAAACAGCTATAGGTCATTGTTCATCGTTGGACTCTCTCTCTTCCTTGGCTTATCTGTTCAACAGTATTTCAACGAATATCTGTTGATATCTGGACATGGCCCTGTTCACACGGGCACCACTGCGTTCAACGATATAGTGCAAGTGATTTTCTCATCGCCAGCAACTGTAGCAATTATTGTTGCTTACTTCTTGGATTTAACTTTGAATCGCGGAGATAGCTTAACTCGCAGAGACAGTGGGAGACACTGGTGGGAAAAATTCAGGAATTTCAATCACGATACTCGAAGCGAAGAGTTCTATTCACTTCCTTTCAACCTCAACAGATACTTTCCATCGTTTTGA 1590 0.4396 MAAGGGGGKADEFLPHPVKDQLPGVDYCVTSSPSWPEGIILGFQHYLVVLGTIVIVSTILVPLIGGGNVEKAETIQTLLFIAAINTLLQTLFGTRLPVVVGPSYSFLIPAVSIAFSTRMSVYADPHQRFKQSMRAIQGALIVASFFQIFVGFFGFWRIFARFLSPLSVAPLVTLTGLGLFMLGFPKLADCVEIGLPALLIIIILSQYIPQRMKSRGADRFAVMVSIGIAWAFAEILTAAGAYNKRSPRTQLSCRTDRSGLISAAPWIRVPYPFQWXRPSFNAGDAFAVIAASLVAIVESTGTFIAASRFGSATPVPPSVLSRGVGWLGIGTLLDGLFGTGTGSTASVENAGLLGLTRVGSRRVIQISAGFMFFFSILGKFGAVLASIPLSIIAAIYCVLFAYVASAGLGFLQFCNLNSYRSLFIVGLSLFLGLSVQQYFNEYLLISGHGPVHTGTTAFNDIVQVIFSSPATVAIIVAYFLDLTLNRGDSLTRRDSGRHWWEKFRNFNHDTRSEEFYSLPFNLNRYFPSF* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2386 529 Pfam Permease family 39 439 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vra8g2386 529 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 7 528 - -
Vra8g2386 529 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED 7 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2386 Vra-Chr8 42035145 42039696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2386 9 529 Organic Solute Cotransporters AT1G49960 70.554 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2386 - K23717 gmx:100820533 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2386 8 42035145 42039696 Vra8g2386 8 42035145 42039696 ECH