Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2374 ATGATTTTGAAGTCAATAGTTGCATCAGCGAGCGATCTAAGTGTAGTGAGTGTTGCTGGGAACGCTCCGCTCGAATTCAAGAATCGAGTTTTTGGCGGCCGAGTCATCCGCCTCGGATTTCGTTTTAACAGAGGGAGATGGAAGGGGAATGAAAGGTTTGACTTTAAGGTTCGTGCTGCTGTGGAGGTGGGAGTGGGGAGTTCAAAGAGTAAGGCTTTGCAGGGCAATTCTGGATTGGATGTGGTTTCAGAGGGAGAGTTAACGGTAAAGGGGTTTGCGGGGTTGCGGAAGACCAAACTCGTCTGCACAATTGGTCCTGCTTGCAGCTCTTTGGAGGAACTTGAGAATTTGGCAACAGGAGGCATGAATGTTGCCAGGCTCAATATGTGCCATGGCACCAGGGAGTGGCACCGTGATGTGATTAGGAAGATCAAGAAGTTGAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAAGGTAGTCAGATTCATGTAGTTGATCATGGAGCCTCATCCTCGGTTAAAGTAGAAGAAGGTTCAATTTGGCATTTTACTGCTGAGCATTTTGAGGGTTCTCGCCCATTCACAGTACAGACAAACTACACAGGTTTTTCTGAAGATATTGAAGTTGGTGATGAACTTGTTATTGATGGTGGAATGGCTTGCTTTGAAGTCGTTGAAAAGAAAGGAAATGATTTGCATTGTAAGTGCATCGATGCTGGTCTTTTCCTTCCTGGAGCTAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTTAGGAGGAATTACAAGCTTCCTACTCTATCAACAAAGGATTGGGCTGACATTGACCTCGGTATAGCTGAGGGTGTTGATTTTTTTGCCTTATCCTTTGTCAATCACGCTGATTCTGTTAAGGATTTAAAGAACTACCTCTCCACGAAGTCAACCAAATCCATTAAAGTTTTGTCGAAGATAGAAAGCTTAGAATCTCTTCATAAACTTGAGGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGGGGTGATCTTGGGGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACGTATGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACCCCAACACGTGCCGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCCGGTGAATCAGCTATTGGGTCATATGGGCGTAAAGCTTTGGCAGTCTTGGATATGACTAGCAGTAGAATGGAATCATGGAATCGGGAGGAGAACAAGCAGAATCTTCTCAACCATAACCAACTTGGAGCAGAATTGCCAGAATGCATCACTGAGCAAATATGTAATTGTGCCGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTCGTGTACACGAAGCATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCTATCTTTGCGTTCACCGACGATGAAAGTACCCGCATGGCTCTGAATCTGTTATGGGGGGTTGTACCCCTTCTGGTTGATTTATCAGATGATGCTGAATCTAACATCTCAAAGTCAGTCCAACTTATGGAATCCAAAGGATTGATCAGACAAGGAGATGTTGTTCTAGTGGTCTCGGATATTGCTCACACACGATCCTCTCCTATGGCTCTCCAATCAATTCAGGTGAAGACTATTGCCTAA 1746 0.4462 MILKSIVASASDLSVVSVAGNAPLEFKNRVFGGRVIRLGFRFNRGRWKGNERFDFKVRAAVEVGVGSSKSKALQGNSGLDVVSEGELTVKGFAGLRKTKLVCTIGPACSSLEELENLATGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFCVSVMIDTEGSQIHVVDHGASSSVKVEEGSIWHFTAEHFEGSRPFTVQTNYTGFSEDIEVGDELVIDGGMACFEVVEKKGNDLHCKCIDAGLFLPGAKFSFWRDGKLVRRNYKLPTLSTKDWADIDLGIAEGVDFFALSFVNHADSVKDLKNYLSTKSTKSIKVLSKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWNREENKQNLLNHNQLGAELPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTDDESTRMALNLLWGVVPLLVDLSDDAESNISKSVQLMESKGLIRQGDVVLVVSDIAHTRSSPMALQSIQVKTIA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2374 581 Pfam Pyruvate kinase, alpha/beta domain 463 563 IPR015795 -
Vra8g2374 581 Gene3D - 98 428 IPR040442 -
Vra8g2374 581 PANTHER PYRUVATE KINASE 43 580 - -
Vra8g2374 581 PRINTS Pyruvate kinase family signature 153 169 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 SUPERFAMILY PK C-terminal domain-like 457 563 IPR036918 -
Vra8g2374 581 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Vra8g2374 581 Gene3D - 429 574 IPR036918 -
Vra8g2374 581 SUPERFAMILY PK beta-barrel domain-like 166 249 IPR011037 -
Vra8g2374 581 TIGRFAM pyruv_kin: pyruvate kinase 96 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 Gene3D - 165 267 IPR015806 GO:0004743|GO:0006096
Vra8g2374 581 Pfam Pyruvate kinase, barrel domain 96 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra8g2374 581 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 90 438 IPR015813 GO:0003824
Vra8g2374 581 PANTHER PYRUVATE KINASE 43 580 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2374 Vra-Chr8 41935302 41939452 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2374 K00873 - gmx:100780644 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2374 8 41935302 41939452 Vra8g2374 8 41935302 41939452 ECH