Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2307 ATGCTTCCCAAATCAATTCACCCCTCACTGGAACCTCAAACCAAAACACTTCATAACAAAGCCACTCTCACTCCTTCCATCACCTCCCTCCTCAAACCGCTTTCCTCACCCCAAATCCCTCGTTCATGGATATTCCTCACCGTCCTCTTCGTCCAGATCCTCCTCCTCTGCAACCTCCGCATGTTTTCCTCCTCAATCCCCTCTCCTCTCCCCGCCCCCATCGTCCATCACTCTTCCCAAGCCCCAGACCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAAACCTTCAACTACGAAATCCTCCAGAATTGCGACAACCTCAACCCCTGGGGCTCCCGCTGCAACTCCCTCTCTAACAACGGATTCGGCCAGAACGCCGCCGCGCTGGCCGGAATCGTTCCTGAGGATCTCCTCCCGGCGTGGCACTGGACCGACCAGTTCGTCACTGAAGTCATCTTCCACAACCGATTATTGAATCACAGGTGCAGGGTTAAGGAGCCGGAATCCGCTACGGCATTCTACATACCGTTCTACGCTGGACTCGCGGTTGGGAAGTACCTGTGGCTCAACTCAACAGCTGACGAACGCGATCGCCACTGCGACATGATGCTGCGCTGGGTTACGGACCAACCATATTTTAAAAGATCAAACGGTTGGGATCATTTTATTACCATGGGACGCATCACATGGGATTTTCGCCGCTCTAAGGAACGCGATTGGGGTTCCAGCTGCATCTACAAGCCTGGGATAAGAAACGTCACGCGCCTTCTCATAGAGCGTAATCCTTGGGACTATTTCGACGTAGGTGTTCCCTATCCCACCGGATTCCATCCGCGCTCTAAATCCGACGTCACGCGCTGGCAGAACTTCGTCCACGAGCGCCAACGTAATGCGCTCTTCTGCTTCGCCGGCGCCCCTCGACGCGCGTTCCGCCAAGACTTCCGCGGGATTTTGCTGAGCCAATGCCGCGACGCGGGCGAGTCGTGCCGCACCGTGAACTGCACTGGGACGCGGTGCTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTGGACTCTGATTTTTGCTTACAGCCGAGAGGGGACAGCTTCACACGCAGGTCCATTTTCGATTGCATGGTGGCCGGTTCGATTCCGGTTTTCTTCTGGCGGCGAAGCGCGTACCTGCAGTACGAGTTGTTCTTGCCGGTCGAACCGGGAAGTTACTCAGTTTACATAGATCGGAACGCAGTTAAGAATGGAACCGTAACCGTGAAAAACGTGCTGGAGAAGTTCAGCAGGGAGAAAGTGCGGCAAATGAGGGAGAAAGTGATTGAGTACATTCCGAGGTTGATTTACGCTAACACGAAAGATGGGTTAGACGATATGAAGGATGCGTTCGATGTTGCCATCGAAGGTGTGCTGAAAAGGTTCAAGGAACAGGAACAACCGAAGTTTCATAAGTGGAAATAA 1461 0.5407 MLPKSIHPSLEPQTKTLHNKATLTPSITSLLKPLSSPQIPRSWIFLTVLFVQILLLCNLRMFSSSIPSPLPAPIVHHSSQAPDQCGSGKVFVYDLPQTFNYEILQNCDNLNPWGSRCNSLSNNGFGQNAAALAGIVPEDLLPAWHWTDQFVTEVIFHNRLLNHRCRVKEPESATAFYIPFYAGLAVGKYLWLNSTADERDRHCDMMLRWVTDQPYFKRSNGWDHFITMGRITWDFRRSKERDWGSSCIYKPGIRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTRWQNFVHERQRNALFCFAGAPRRAFRQDFRGILLSQCRDAGESCRTVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRSAYLQYELFLPVEPGSYSVYIDRNAVKNGTVTVKNVLEKFSREKVRQMREKVIEYIPRLIYANTKDGLDDMKDAFDVAIEGVLKRFKEQEQPKFHKWK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2307 486 PANTHER XYLOGLUCAN GALACTOSYLTRANSFERASE XLT2 18 479 - -
Vra8g2307 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 18 479 IPR004263 GO:0006486|GO:0016757
Vra8g2307 486 Pfam Exostosin family 85 423 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2307 Vra-Chr8 41314704 41316671 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2307 - - gsj:114403132 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2307 8 41314704 41316671 Vra8g2307 8 41314704 41316671 ECH