Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2279 ATGGGTTCCTCTGCAGCCAGAAAAAACATTGCAGATTCATCGTCCTGGTACTGTGCCATGATGCTGTTGGGCATGATTCTGTTGGGGTCTGTAAGGGAAAGCGCTGTGGCAGGAGAAGCTGAGGCTGTAAAAGGGAACAGCCTCCGTGAAGGACCGTGTGATGAAATCTACGTTGTGGGAGAAGGAGAGACCCTGCACACGATCAGCGACAAGTGCAATGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGATCCAGATGATGTTTACCCTGGCCTTGTCATCCAAATCATCTCTACCCGTTAA 309 0.5081 MGSSAARKNIADSSSWYCAMMLLGMILLGSVRESAVAGEAEAVKGNSLREGPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVYPGLVIQIISTR* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2279 102 CDD LysM 56 98 IPR018392 -
Vra8g2279 102 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 8 101 - -
Vra8g2279 102 PANTHER EMBRYO SAC 1 8 101 - -
Vra8g2279 102 Gene3D LysM domain 49 102 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2279 Vra-Chr8 41071079 41071804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2279 - - gmx:100500035 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2279 8 41071079 41071804 Vra8g2279 8 41071079 41071804 ECH