Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2272 ATGGCCTCCTTAAGCTGCCACTTTCATACCACCAACTTGTTGAATTCTAAGAATGTCAATAGCGGGAAGAAGAAACGTTTCATATCTTGCTCAGCGCAGCCTACACAAAGCAATATTAAGGTTGTGATTAATGGGGCAACCAAGGAAATAGGAAGGGCAGCAGTAGTTGCAGTGACTAAGGCTAGAGGAATGGAGGTTGCAGGAGCTGTGGATACTTGCCATACTGGGGAAGATATTGGAAAGGTCTGTGGCATGGAAGAGCCCCTTGAAATACCCATAATAAATGACCTTACTTTGATTTTGGGCTCTATATCTCAGTCCAAGGCAACTGGAGTTGTAGTTGATTTCACCGACCCTTCCTCAGTATATGAAAACGTAAAACAGGCAACAGCATTTGGCATGAAAAGCATAGTTTACGTGCCTCGAATCAAATTAGACACGGTGGCTGCATTATCTGCACTCTGCGAGAAGGCCACCATGGGTGTTTTGGTTGCACCAACCCTTTCCATAGGATCAATATTGCTGCAACAAGCTGCGATTACAGCTTCTTTCCATTACAGCAACGTCGAAATTGTGGAGTCCAGGGCTAATGCAACAGAGCTTCCATCAGCAGATGCAAACCAAATTGCCAACAATCTCTCCAACATAGGTCAAATCTATAACAGAGAAGACTCTTCAACAGATGTCCCGGCAAGGGGTCAAGTCCTTGGAGATGGAATTCGTGTTCACAGCTTGGTCCTTCCAGGACTTCCTTCTAGTACAGCAGTTCACTTCTCTGGTCCAGGAGATGTTTACTCTATCAAGCATGATATCACAGATGTGCAGTGCCTCATGCCAGGCTTGCTCTTAGCCATTAGAAAAGTAGTGCGTCTCAAGAATTTGGTATATGGCCTGGAGAAGTTTATATGA 909 0.4477 MASLSCHFHTTNLLNSKNVNSGKKKRFISCSAQPTQSNIKVVINGATKEIGRAAVVAVTKARGMEVAGAVDTCHTGEDIGKVCGMEEPLEIPIINDLTLILGSISQSKATGVVVDFTDPSSVYENVKQATAFGMKSIVYVPRIKLDTVAALSALCEKATMGVLVAPTLSIGSILLQQAAITASFHYSNVEIVESRANATELPSADANQIANNLSNIGQIYNREDSSTDVPARGQVLGDGIRVHSLVLPGLPSSTAVHFSGPGDVYSIKHDITDVQCLMPGLLLAIRKVVRLKNLVYGLEKFI* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2272 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 193 IPR036291 -
Vra8g2272 302 Pfam Dihydrodipicolinate reductase, N-terminus 39 166 IPR000846 GO:0008839|GO:0009089
Vra8g2272 302 Gene3D - 38 195 - -
Vra8g2272 302 PANTHER DIHYDRODIPICOLINATE REDUCTASE-LIKE PROTEIN CRR1, CHLOROPLASTIC 1 302 - -
Vra8g2272 302 TIGRFAM dapB: 4-hydroxy-tetrahydrodipicolinate reductase 39 302 IPR023940 GO:0008839|GO:0009089
Vra8g2272 302 Pfam Dihydrodipicolinate reductase, C-terminus 175 301 IPR022663 GO:0008839|GO:0009089
Vra8g2272 302 PANTHER DIHYDRODIPICOLINATE REDUCTASE 1 302 IPR023940 GO:0008839|GO:0009089
Vra8g2272 302 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 169 273 - -
Vra8g2272 302 PIRSF DHPR 37 302 IPR023940 GO:0008839|GO:0009089
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2272 K16908 - gmx:100782083 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2272 8 40972757 40975709 Vra8g2272 8 40972757 40975709 ECH