Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2269 ATGGCTAATACTGATTCTTCTTCCCTCACCATTTTCAACGTAAGAAAAACGCCAACCTTCATCCTCGTTCTTCTTCTCTGCATCGCCTCCTACTTCCTAGCCGCGTACCACCAAGGAGAGCCCCTCCTCACCACCGCGACCACCGCCTCCCTCTACCTCTCCGCATCGTGCAACCACCTCACTGCCCAGTCTTCTAGAACGTTCCCACGCTGCAGCGCCAACTTCAGTGAGTACACGCCCTGCGAGGATCCTAAACGGTCTCTAGGGTACAAGCGGCACAGAATGATATACCGAGAGAGGCACTGCCCCGAGGAGCCCTTGAAATGTAGGGTTCCTGCCCCTCATGGATATCGAAATCCCTTTCCCTGGCCCGCGAGTAGAGACCGTGCGTGGTTCGCTAACGTCCCCCACCGTGAGCTCACCGTGGAGAAGGCCGTGCAGAACTGGATCCGCTTCGAGGGCGAGCGCTTCGTTTTTCCCGGTGGCGGAACCACCTTCCCCAACGGCGCCGATGCCTACATTGAGGACATCGGAAAGTTGATTAATCTCAGAGACGGCTCCATTAGAACTGCTCTGGACACTGGTTGTGGGGTGGCTAGTTGGGGAGCGTATCTTCTCTCACGCAATATACTAACATTGTCAATGGCACCAAGGGACACCCACGAAGCACAGGTTCAATTTGCCCTTGAGCGTGGAGTTCCTGCACTCATTGGAATTCTTGCCTCTAAGAGGCTACCTTTCCCTTCAAGAGCTTTTGACATGTCCCATTGCTCTCGCTGCCTCATCCCATGGGCTGAATATGATGGAGTTTTTCTCAACGAAGTGGATCGAGTTCTACGCCCTGGCGGGTATTGGATTCTGTCTGGGCCACCAATCAACTGGAAGAAATACTGGAAAGGGTGGCAAAGAACGGAGAAGGATTTGAACGAAGAGCAGACCAAAATTGAGGAGGTAGCCAAAAGCCTTTGCTGGAACAAGCTAGTGGAGAAGGATGATATAGCTATCTGGCACAAACCCAAAAATCATTTAGATTGTAAGCTCACACAAAAGAGGTCTTTTTGCAGTGCACAAAATGACCCTGACAAAGCCTGGTATACCGATATGCAGACATGTTTGACTCGTCTTCCTGAAGTGTCAAACAGAGAAGAGACTTCGGGTGGGGTGGTGGATGATTGGCCAAAGAGATTAAAATCCACCCCACCGAGGATTTATAGGGGTACCATAGAAGGGGTTACAGATGAAACCTTTTCAAAAAATCATGAGCTGTGGAAGAAAAGGGTATCATATTACAAGACAGTGAACAAACTAATAGGAACCGGGAGATACCGTAATCTTTTGGATATGAATGCTTATTTGGGAGGATTTGCTGCTGCACTAATTGAGGACCCTGTTTGGGTCATGAATGTGGTTCCTGTTCAGGCTAAGGTTGACACACTTGGATCAATATATGAACGCGGGCTGATTGGAATATATCATGACTGGTGTGAACCAATGTCTACTTATCCTAGAACTTATGATCTAATTCATGCTGATTCAGTGTTCAGTCTTTACAGTAACAGATGTGAGTTGGAAGACATTCTGTTAGAAATGGATAGGATTGTTCGACCTGAAGGATGTGTTATCATACGAGATGACGTTGATATGTTGGTCAAAGTAAAGAGCATTGTGAATGGATTGGAATGGGACACTATAATTGTAAACCATGAAGATGGGCATCTTAAGAAGGAGAAAGTTCTATTTGCTGTGAAGAAGTATTGGACGGAAAATTAA 1770 0.4763 MANTDSSSLTIFNVRKTPTFILVLLLCIASYFLAAYHQGEPLLTTATTASLYLSASCNHLTAQSSRTFPRCSANFSEYTPCEDPKRSLGYKRHRMIYRERHCPEEPLKCRVPAPHGYRNPFPWPASRDRAWFANVPHRELTVEKAVQNWIRFEGERFVFPGGGTTFPNGADAYIEDIGKLINLRDGSIRTALDTGCGVASWGAYLLSRNILTLSMAPRDTHEAQVQFALERGVPALIGILASKRLPFPSRAFDMSHCSRCLIPWAEYDGVFLNEVDRVLRPGGYWILSGPPINWKKYWKGWQRTEKDLNEEQTKIEEVAKSLCWNKLVEKDDIAIWHKPKNHLDCKLTQKRSFCSAQNDPDKAWYTDMQTCLTRLPEVSNREETSGGVVDDWPKRLKSTPPRIYRGTIEGVTDETFSKNHELWKKRVSYYKTVNKLIGTGRYRNLLDMNAYLGGFAAALIEDPVWVMNVVPVQAKVDTLGSIYERGLIGIYHDWCEPMSTYPRTYDLIHADSVFSLYSNRCELEDILLEMDRIVRPEGCVIIRDDVDMLVKVKSIVNGLEWDTIIVNHEDGHLKKEKVLFAVKKYWTEN* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2269 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 99 307 IPR029063 -
Vra8g2269 589 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 429 547 IPR029063 -
Vra8g2269 589 PANTHER METHYLTRANSFERASE PMT20-RELATED 13 588 - -
Vra8g2269 589 Gene3D Vaccinia Virus protein VP39 169 353 IPR029063 -
Vra8g2269 589 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 588 IPR004159 GO:0008168
Vra8g2269 589 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 77 583 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2269 Vra-Chr8 40948558 40952507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2269 - - var:108326640 1192.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2269 8 40948558 40952507 Vra8g2269 8 40948558 40952507 ECH