Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2265 ATGGCCAGAAGAGATCTTGAGAGTGGCGGTGGGAGAACCAAGAACAACAGAACAGAGGGAAACTACACTGCGCATGAGTCTTCTAATCTTTACGAAGCTGATACCCATTGGACATCATGGCTGGTTCCTGTGTTTGTGGTTGCTAATATTGCTGTTTTTGTTATTTCCATGTACATCAACAATTGTCCCAAGAATAACCTCGGTCCCCAAGGTGGCTGCGTGGCCAAGTTCCTTGGAAGGTTTTCCTTCGAACCTATGCAGGAGAATCCGTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGGTGGGATAATGTAGTGAATGGGCATCAAGGATGGAGACTTGTCACTTGCATTTGGTTACACGCTGGGATTATTCATTTGCTTGCTAACATGTTGAGTCTAGTATTCATCGGGATTCGTCTGGAACAGCAATTCGGGTTTGTGAGGATTGGAGTTATATACCTGGTGTCTGGGTTTGGTGGAAGTGTTCTGTCATGTCTGTTTATCAGAGACCACACCTCGGTGGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTATCTGAACTTATCACAAACTGGACTATATATTCCAACAAAGCAATGGCATTACTCACCCTTCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCACACGTGGATAACTTTGCTCACATTGGAGGGTTCCTGGTGGGATTTCTCCTTGGTTTTATTTTGTTGCCTCGTCCTCAGTTTGGATGGTTAGAGCAGCGTCGACTTCCTGCCGGTGTTCGTTTGAAGTCTAAGTACAAAGCTTACCAATATGTTCTATGGGTAGTGTCTCTTGTTCTGTTGACTGCAGGGTTAACAATTGCATTGGTGATGCTATTCCGGGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGGTACCTAACATGTGTCCCGACCTCTAAATGGGAATGCAGCAATAGCAGTTAA 990 0.4566 MARRDLESGGGRTKNNRTEGNYTAHESSNLYEADTHWTSWLVPVFVVANIAVFVISMYINNCPKNNLGPQGGCVAKFLGRFSFEPMQENPLLGPSSSTLTKMGALRWDNVVNGHQGWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSCLFIRDHTSVGASGALFGLLGAMLSELITNWTIYSNKAMALLTLLVIIVINLGIGILPHVDNFAHIGGFLVGFLLGFILLPRPQFGWLEQRRLPAGVRLKSKYKAYQYVLWVVSLVLLTAGLTIALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNSS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2265 329 PANTHER RHOMBOID-LIKE PROTEIN 3 1 327 - -
Vra8g2265 329 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016021
Vra8g2265 329 Gene3D - 32 252 IPR035952 -
Vra8g2265 329 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Vra8g2265 329 MobiDBLite consensus disorder prediction 1 22 - -
Vra8g2265 329 PANTHER RHOMBOID-RELATED 1 327 IPR002610 GO:0004252|GO:0006508|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2265 Vra-Chr8 40929309 40932391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2265 - - gmx:100784224 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2265 8 40929309 40932391 Vra8g2265 8 40929309 40932391 ECH