LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra8g2243	ATGGATTCAAGAGTAGTTCGAAGTGAAGTGCAGGAGAATGATGAACACTACCCCCACATTGTTCCCTTAGAGCAAGTAACACATGGTGAAGAAGATAAACACTTTAATCATGAGAAGAAATCTGTTCTGAATAAAGTGAAGGTAAAGGCTAAGAAAATCAAGGACACGATTAAGAAGCATGGCCATCAAGTCCTTGATCGTGGCCGTGAGTATGACAATGAAGATCAACACAACCTTGATGATGCTGACTTAGATGAGGATGAAGACACGGACAAGGGCACACAAGTTCATGAAACACCAATTCATGAAAGCGAAGATGTTAAAATTGTTACACCCACAAGTGAGCAACTCGAAAATTTAGGGAAGTCGGGAATTGATGTTGGAGATACAACAGTCATGGCAGATGAATCTCATCACGATTCACTACCATTTTCAACTACTGAAACTGGTCATAAGATAGCCTCTGATCCAGCCAAAGTATTTCGGATGGAAGAGAAAGCAGGGCTTCCTAAGGACAATTTGGAGAGGTCAATAGGATTGGAGGAAGAACATTACTCTCCCGGAAGTATGCCTGATGCATATATTCCTCCCAATCATCAAACCAAAGTCACTTATCCAACTGAAGAAGTAAAAGAAGAAATGGAAACCACACCCGTTGAGGAATCTTTTGCAAGAATGAATGTGGAGGAGGAGCCAAAATCTATTTCAGAACTAAACCTGCAGCCAGCTATTGTTGATTCTGAATGCCCTCGTGTTGAAAACCATGATCAGCCCGTGGCACACCTTTCTGCTGCGATGCAAACTCAGTATCCTTCTTCTGAATGTCATGAACAAACGATATCCCCCAAAGTCAACAAAAACCTGGAAAATGTCACAGACAGTGGACAAACTTTCAGCACCATCACAACCGCAGTTGATGAACACTCTTGTAATGAAGCAAACACTTATAAAGTTTTCTCTCCTAAAGATGTCACAGCTTCTGAGGAAGGTTCAGTAGAGAAAGACAACGTGGTAACAAATGAAGAGCAACGAAAAGGTGGGGATGCTTCTAACATGTCTGGCTCGACTGCACAGTATGGGAAGGACATTGCTCACTCTCTGACACAGAAATTAGGTCCAGTTTATGACAAGGTTGCAGGTGTAGGAAGTGCAGTGAAGTCCAAAGTGTATGGAACTGAGACAAAAAATGAGGTCAAAGAACAAGATAAAGGGGTTTCTGTGAAGGACTATTTGGCTGAGAAGCTAAGGCCTGGTGAAGAGGACAAGGCACTTTCTGAGTTAATTTCTGAAACTTTACATAAGAGGAAGGAAGAGACAGTGAAAAATGAGCATCACTTGGATGGTGGGGATGATCCAGGAAAAGGTGTGGTTGACAAGCTTAAGGGTGTTGTTGGCTCATGGTTTGGCAAATCTGAGGGAATAGGAGATGAACATTTATCCAAGAATACAAATTCTGGTGCAGAACTGGAACAGGTTAACCCAGTTGTTGGTGAAAGCAAAGAGTAG	1506	0.4216	MDSRVVRSEVQENDEHYPHIVPLEQVTHGEEDKHFNHEKKSVLNKVKVKAKKIKDTIKKHGHQVLDRGREYDNEDQHNLDDADLDEDEDTDKGTQVHETPIHESEDVKIVTPTSEQLENLGKSGIDVGDTTVMADESHHDSLPFSTTETGHKIASDPAKVFRMEEKAGLPKDNLERSIGLEEEHYSPGSMPDAYIPPNHQTKVTYPTEEVKEEMETTPVEESFARMNVEEEPKSISELNLQPAIVDSECPRVENHDQPVAHLSAAMQTQYPSSECHEQTISPKVNKNLENVTDSGQTFSTITTAVDEHSCNEANTYKVFSPKDVTASEEGSVEKDNVVTNEEQRKGGDASNMSGSTAQYGKDIAHSLTQKLGPVYDKVAGVGSAVKSKVYGTETKNEVKEQDKGVSVKDYLAEKLRPGEEDKALSELISETLHKRKEETVKNEHHLDGGDDPGKGVVDKLKGVVGSWFGKSEGIGDEHLSKNTNSGAELEQVNPVVGESKE*	502

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra8g2243	501	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	1	500	IPR037491	GO:0009737
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	470	501	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	435	455	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	55	128	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	327	342	-	-
	Vra8g2243	501	PANTHER	-	1	500	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	90	109	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	59	76	-	-
	Vra8g2243	501	MobiDBLite	consensus disorder prediction	324	355	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra8g2243	Vra-Chr8	40712317	40715184	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra8g2243	-		-	var:108325293	833.172

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra8g2243	8	40712317	40715184	Vra8g2243	8	40712317	40715184	ECH