Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2214 ATGGCATTGGCTCCTATTCCAAAAGTGGTATTTGGTTTAATTGCATTTGCAATCTTCTGGGTCTTGGCAGTTTTTCCAGCTGTGCCTTTTCTACCTATTGGGAGAACTGCAGGGTCCCTCCTTGGAGCCATGCTTATGGTCCTATTCCAAGTTATTACTCCAGATGATGCTTATGCCACAATTGATCTTCCAATTCTTGGTCTTCTCTTTGGGACAATGGTTGTCAGTGTCTATCTTGAAAGAGCTGACATGTTTAAGTATATAGGGAAGTTGCTGGCTTGGAAGAGTAGAGGTGCAAAGGACTTACTTTGTAGGATATGTGTTATCTCTGCTGTCTCAAGTGCTCTTTTCACAAATGACACCTCTTGTGTGGTTTTGACTGAATTCATATTGAAAATTGCTAGGCAGCATAACCTTCCACCAACACCCTTTCTACTTGCCCTTGCTTCGAGTGCTAATATTGGGTCTTCAGCAACTCCAATTGGCAACCCCCAAAACCTGGTTATAGCTGTTCAGAGTAAAATATCATTTGGTAATTTTCTGGTTGGTATTCTTCCAGCTATGGTGGCAGGAGTTGTGGCAAATGCTACAATTCTTCTAATCATGTATTGGAAGTTATTGTCCGTTCATAAGGACGAAGAAGATGCAGGAGCAGAAGCTGTGGTAGAGGAGTATGATTCTCATCGGTTTTCTCCTGCCACTATGTCTCATTTTTCATCCTTGAATTCTCAAGAATGGAATTCCCATCTTGAAGCTATCAGTGTTCAGAACTCTCCTCAACAGATTCTAAGAAACCGATCAATTGCAAGTGAAATTATTGGGGCTTCTAGCAACACTTTTGATTCTGCAAGAATCTCAAGTTTACCAAGGGATGGAACAAATGGTGTGCCATCTCTGACAAAGGAGGAAACTAGTCCTACAAGTTCTTCAGCAACAGTGGATACACTTATTCACCCTTCGGAAAGAAAAAACAATCTTATCATAAGATGGAAAAGGGTACTGTGGAAATCTTGTGTTTACATCATCACAGTTGGAATGTTGGTTGCTTTACTTCTAGGTTTAAATATGTCATGGACTGCAATTACTGCGGCGCTTGCCCTTATCGTTCTTGATTTCAAAGATGCTAGGCCATGTTTAGAAAAGGTTTCATATTCACTTTTGATATTCTTTTGTGGAATGTTTATAACGGTAGATGGCCTCAATAAAACTGGGATTCCAAGTGCTTTGTGGGACATAATGGAGCCCTATTCTCGCGTTGATCGAGCTAGTGGAGTTGCAATTCTTGCAGTTGTCATACTTGTATTATCAAATTTGGCTTCAAATGTGCCGACAGTTCTGTTGCTTGGAGGACGTGTAGCAGCCTCAGCTGCTGCAATTTCCAAAGCAGATGAGAAGAAGGCATGGCTGATATTGGCTTGGGCCAGCACCATATCAGGGAATCTCTCTTTGTTGGGATCAGCTGCTAACTTGATAGTGTGTGAACAGGCTATCCGTGCTCCAAACCTACCATACACGTTAACCTTCTGGAGTCACCTGAAATTTGGCCTTCCTTCCACGATCATAGTCACAGCTATAGGTTTGACATTCATAAGATGA 1596 0.4173 MALAPIPKVVFGLIAFAIFWVLAVFPAVPFLPIGRTAGSLLGAMLMVLFQVITPDDAYATIDLPILGLLFGTMVVSVYLERADMFKYIGKLLAWKSRGAKDLLCRICVISAVSSALFTNDTSCVVLTEFILKIARQHNLPPTPFLLALASSANIGSSATPIGNPQNLVIAVQSKISFGNFLVGILPAMVAGVVANATILLIMYWKLLSVHKDEEDAGAEAVVEEYDSHRFSPATMSHFSSLNSQEWNSHLEAISVQNSPQQILRNRSIASEIIGASSNTFDSARISSLPRDGTNGVPSLTKEETSPTSSSATVDTLIHPSERKNNLIIRWKRVLWKSCVYIITVGMLVALLLGLNMSWTAITAALALIVLDFKDARPCLEKVSYSLLIFFCGMFITVDGLNKTGIPSALWDIMEPYSRVDRASGVAILAVVILVLSNLASNVPTVLLLGGRVAASAAAISKADEKKAWLILAWASTISGNLSLLGSAANLIVCEQAIRAPNLPYTLTFWSHLKFGLPSTIIVTAIGLTFIR* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2214 531 PANTHER TRANSPORTER ARSB-RELATED 1 531 - -
Vra8g2214 531 Pfam Citrate transporter 27 477 IPR004680 GO:0016021|GO:0055085
Vra8g2214 531 MobiDBLite consensus disorder prediction 288 314 - -
Vra8g2214 531 PANTHER TRANSPORTER ARSB-RELATED 1 531 - -
Vra8g2214 531 CDD YbiR_permease 28 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2214 Vra-Chr8 40450587 40454826 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2214 - - gmx:100781849 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2214 8 40450587 40454826 Vra8g2214 8 40450587 40454826 ECH