Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2205 ATGAATTCAGAGTCAGAAGTAAATGAAGGTGTTTCTGGGAAGATGAAGAAGTATTTGCAAGTAGGGATATGGTGGTTCTCATTGTTCATCTTTGTTGGGTATCTATTGCTTTGGATTGTGAGACCTACCAACATCTTCTATCTACGATGGTTTCCAGACATTGAAGCAAAGGCAGATTCTGTATACTTGGGTGAACAAGGGACAACCATACTGATTTACACATTTCCAATCTTACTAATTGCCACTTTGGCGGGTTTATACCTTCATTTGGAGCAAAAACCTTGGAATCACAATACAGAAAGGAAGGGGAGATTCCTAGGATTGGCATCATGGAAAAGACCATTGCTTACAAAAGGTCCTCTTGGGATAATCACCATGACAGAGCTCTCTTTCGCCATCATGTTTGTTTTACTCTTGATATGGACCTTTTGCTCCTACTTGCATAGCATGTTTGCAAGCGCCGCGCAAGATGCAGCTAAGGAGAGAGACCAAGTGTGGGAAGTCAAGCTCGAATATTCAGCCATTGCTTTAGGCCTTGTTGGGAATATTTGTTTGGCTTTATTGTTCTTTCCAGTCTCAAGAGGGTCTTCAATTTTGAGGCTCCTTGGCCTAACTTCAGAGGGAAGCATCAAGTATCATATATGGCTCGGACACACTGCAATGCTCCTCTTCACAGCCCATGGTCTTGGTTATATCATTTTTTGGTATAAGACACACCAAATCTTAGAGATATTCAAATGGAACAAAGTTGGAGTGTCAAATGTGGCTGGAGAAATTTCTCTACTTGCTGGATTAATCATGTGGGCTGCTACCTTACCTTCCATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCACTACCTCTACATTGTCTTTGTAATCTTCTATGTGCTACATTTGGGATTTTCCTCCTCTTGCGTGGTGCTTCCAGGATTTTACCTATTCATGATCGACCGCTACTTGAGATTCCTACAGTCTCAGCAAAAAATTCGGTTGGTTTCTGCCAGAGTTTTGCCTTGTGAAGCTGTTGAATTAAATTTCTCCAAGAACCTAGGACTGAGCTATGCTCCCACAAGCACCATTTTCATTAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAGTCACCTCCTGCAGTGATACTGATCCTGACACCTTAAGCGTTGTCATTAAAAGTTCAGGAACCTGGTCCAAATCTTTGTACCAGAAGCTATCATCTTCATCTCCATTATCCCACCTTGATGTCTCCATTGAAGGACCCTATGGAACGGGTTCAGCCTTTTATTCAAGGCATGAATTGCTTGTGTTGATAAGTGGAGGAAGTGGCATTACTCCTTTCATTTCCATAATCCGTTCACTGGTCTTTAAGGCCAACACTGAAGGTGGCAAAACTCCAAGAGTTCTTCTTCTGTGTGCCTTCAGGAAGTGTATTGATCTCTCCATGATAGACCTCATCCTCCCAGTTTCCGCCACCACCACCACCTTCGATATCTCACGCTTGCAGCTCCATATTGAAGCCTATGTAACCAGAGAGAAACAGCCAGACATGAATGACAAAAGGCTTACTCAAACATCATGGTTCAAGGCAAATCTATTAGATGAACCAGTTTCTCAAGTTTTAGGAAAAAACAGTTGGCTCTACCTTAGCATTATCATCTCATCCTCCTTTATATTATTCCTTCTACTTATTGGCATCCTAACTAGATACTACATATATCCAATTGACCATAATACGGACCTGATATACCCTAATTTTTCAAGGTCAAGTTTAAGCATGTTATTCATATGCATATCTATTGCCATTGTAGCAACATCTGCTTTCCTATGGAACAAGAAACAGAACAAGGATTTGGGGCAGATTAAAAACATCTACACATCAGATCAATCAACTTCTCCGGGTTCAGGATACTACAATGCTGACAAAGAATTAGGCAGCCTTCCCCTCCAATCCCTTGTCCAAACAGCTAACGTACACTATGGAGAAACACCAGACATAAAAAAAATACTATCCGGCTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCAATTTGCACTTCTTGTTCCACAGATGACCTACACTTTGAGTCAGTTAGCTTCAGCTGGTGA 2151 0.4142 MNSESEVNEGVSGKMKKYLQVGIWWFSLFIFVGYLLLWIVRPTNIFYLRWFPDIEAKADSVYLGEQGTTILIYTFPILLIATLAGLYLHLEQKPWNHNTERKGRFLGLASWKRPLLTKGPLGIITMTELSFAIMFVLLLIWTFCSYLHSMFASAAQDAAKERDQVWEVKLEYSAIALGLVGNICLALLFFPVSRGSSILRLLGLTSEGSIKYHIWLGHTAMLLFTAHGLGYIIFWYKTHQILEIFKWNKVGVSNVAGEISLLAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVIFYVLHLGFSSSCVVLPGFYLFMIDRYLRFLQSQQKIRLVSARVLPCEAVELNFSKNLGLSYAPTSTIFINVPSISKLQWHPFTVTSCSDTDPDTLSVVIKSSGTWSKSLYQKLSSSSPLSHLDVSIEGPYGTGSAFYSRHELLVLISGGSGITPFISIIRSLVFKANTEGGKTPRVLLLCAFRKCIDLSMIDLILPVSATTTTFDISRLQLHIEAYVTREKQPDMNDKRLTQTSWFKANLLDEPVSQVLGKNSWLYLSIIISSSFILFLLLIGILTRYYIYPIDHNTDLIYPNFSRSSLSMLFICISIAIVATSAFLWNKKQNKDLGQIKNIYTSDQSTSPGSGYYNADKELGSLPLQSLVQTANVHYGETPDIKKILSGCDGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESVSFSW* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2205 716 CDD NOX_Duox_like_FAD_NADP 333 514 - -
Vra8g2205 716 PANTHER NADPH OXIDASE 18 715 - -
Vra8g2205 716 Pfam FAD-binding domain 330 427 IPR013112 GO:0016491
Vra8g2205 716 SFLD Ferric Reductase Domain 64 716 - -
Vra8g2205 716 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 419 494 IPR039261 -
Vra8g2205 716 Pfam Ferric reductase NAD binding domain 435 699 IPR013121 GO:0016491
Vra8g2205 716 PRINTS Cytochrome B-245 heavy chain signature 231 251 IPR000778 GO:0016020|GO:0016491
Vra8g2205 716 PRINTS Cytochrome B-245 heavy chain signature 417 430 IPR000778 GO:0016020|GO:0016491
Vra8g2205 716 PRINTS Cytochrome B-245 heavy chain signature 440 457 IPR000778 GO:0016020|GO:0016491
Vra8g2205 716 Pfam Ferric reductase like transmembrane component 177 297 IPR013130 -
Vra8g2205 716 PANTHER FERRIC REDUCTION OXIDASE 4-LIKE 18 715 - -
Vra8g2205 716 SUPERFAMILY Riboflavin synthase domain-like 330 427 IPR017938 -
Vra8g2205 716 SFLD Ferric reductase subgroup (FRE) 14 716 - -
Vra8g2205 716 Gene3D - 419 546 IPR039261 -
Vra8g2205 716 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 326 431 IPR017927 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2205 Vra-Chr8 40378305 40382138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra8g2205 28 716 Miscellaneous Gene Families AT1G01580 50.647 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2205 K00521 - gmx:100779692 1189.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2205 8 40378305 40382138 Vra8g2205 8 40378305 40382138 ECH