Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2197 ATGAAGAAAGTTGTGTTGAAGGTGGATGTACATGAAGACAAAATCAAGCAAAAGGCTATGAAGGCTGTCTCTGGCATTTCAGGTGTGGAGTCAGTTTCAGTGGACATGAAAGAGAAGAAATTGACCTTGATTGGGGACATTGATCCAGTACAAGTAGTTGCGAAGCTAAGGAAGTTCTGTCACGCTGACATAGTTTCTGTTGGACCTGCAAAAGAGGAAAAGAAAGAAGAACCTAAAAAGGATGATAATAAAAAGAAGGAAGAAGAAAAGAAAGATTCTACAAAAGAAACTGTTATAGATCCGCTCAAATTCTATCAAACGTATGGATATTATTATCAGATGAAACCACAATACAATCCGTATTACAGCGCCATAAGTGTGGAAGAGGATCCTAATGGCTGTGTCATTGTCTAA 414 0.3816 MKKVVLKVDVHEDKIKQKAMKAVSGISGVESVSVDMKEKKLTLIGDIDPVQVVAKLRKFCHADIVSVGPAKEEKKEEPKKDDNKKKEEEKKDSTKETVIDPLKFYQTYGYYYQMKPQYNPYYSAISVEEDPNGCVIV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2197 137 Gene3D - 1 73 - -
Vra8g2197 137 MobiDBLite consensus disorder prediction 68 95 - -
Vra8g2197 137 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 137 - -
Vra8g2197 137 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
Vra8g2197 137 CDD HMA 21 58 IPR006121 GO:0046872
Vra8g2197 137 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Vra8g2197 137 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g2197 Vra-Chr8 40335901 40337070 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2197 - - var:108325259 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2197 8 40335901 40337070 Vra8g2197 8 40335901 40337070 ECH