Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g2187 ATGACAAGCCCTTCAGAGAGATACCAAAAACTTGGCTTAAGAGAGTCTCTACAAAAGTGTTACAGATACCCAATTGCCTGCAAAGAGCTAAGCTTTATCCTCAGAGAAGCCTTTCATCAAATTCCCAAAAGTTTGCAATCCATAATCTTCGAAGATACCCTCTTGGCTTTTCGTCTCCTCCCAGAAATAGAGACTAAGAGTGCTGTTTCAGCAGTCCACTTCCTCCTTCAGAGTGTAGAAGCAGCACTACCGAATCGAAAAAAGAATGTGGCTGTAACAGAATTTAAGCATGCTATGGTTTCTCATAAGAGACGCAGCAAAGCTCAACTGGTAGAGAAAGCTTCAGTGCAACTTCCACAAGATATTCTTGTACACGTTTTCAGTTTTCTTGATATGAAATCTTTGGTTTCAGCGGGGCTAGTCTGCTGGTCATGGAACATAGCTGCAAATGATAACCGTCTGTGGCAGATGCAGTATGTTGTACTGTTCGGTAATGGTGCTAAACTGAAGCATACGAAACCGGTTGAGGGAAAGAACTATAGGCTTTTGCAGGGAACCGTGGATAATAGACTTATTACTAACTGGAAAGACAGTGTAAAAGGAGCATACACTGGAGCATTATCTAGTATATTAACAACCAACAGGGGATATTGTGGACACTGCAAATCAGTAGTTTGGCTAAATAACGCAAAATGTCCCAATTTACACTCTGGAATATCTGAAATTCAAGATATCAAGCCCGTAACAGCATTCCAGGTTGTGGAATATCTTTTAGATGATTCTCTATCCATAACATCCTCCTCAGACAGTGACAGTGATTATGAAGGAGGGCCAGTTTCCAAGTTATGGGCATATGGGAAGTTCAGGAAGTAA 873 0.4124 MTSPSERYQKLGLRESLQKCYRYPIACKELSFILREAFHQIPKSLQSIIFEDTLLAFRLLPEIETKSAVSAVHFLLQSVEAALPNRKKNVAVTEFKHAMVSHKRRSKAQLVEKASVQLPQDILVHVFSFLDMKSLVSAGLVCWSWNIAANDNRLWQMQYVVLFGNGAKLKHTKPVEGKNYRLLQGTVDNRLITNWKDSVKGAYTGALSSILTTNRGYCGHCKSVVWLNNAKCPNLHSGISEIQDIKPVTAFQVVEYLLDDSLSITSSSDSDSDYEGGPVSKLWAYGKFRK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g2187 290 Pfam F-box-like 117 157 IPR001810 GO:0005515
Vra8g2187 290 PANTHER OS05G0526300 PROTEIN 1 287 - -
Vra8g2187 290 Gene3D - 94 156 - -
Vra8g2187 290 SMART fbox_2 118 158 IPR001810 GO:0005515
Vra8g2187 290 ProSiteProfiles F-box domain profile. 112 158 IPR001810 GO:0005515
Vra8g2187 290 SUPERFAMILY F-box domain 117 165 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g2187 - - gmx:100789652 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g2187 8 40264645 40268691 Vra8g2187 8 40264645 40268691 ECH