Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g1454 ATGGACCAGCTTCAATCAGCCACCACCTATAATGCACAGAAGCTTAACCCTCAACCACCTTCCAACTCCACCAATGGCGAACCGCTCTATGAAGACTTTGACAGCACCTGTTCCACGCCTTACATCAGTGCCCCTTCAAGTCCCGGCCGAGGGCCGCACCCAGGCTTCTTCTACAGCGCTCCTGCCAGTCCAATGCACTTCGCCATAACCGCTGTCTCTTCCTATGACAAGAGTCCTTCTTCCGCACCAATGGGTTACGAGTTTGAATTCTCCGCCCGGTTCGGTTCAGCGGGTTCTGCCGGTTCAGGTTCCATGAGTTCTGCTGACGAGTTGTTCCTGAATGGTCAGATCCGTCCCATGAAGCTCTCAAGCCACCTTGAACGCCCCCAAGTCCTTGCTCCTTTACTGGATCTGGAAGGTGAAGAGGAGGAAGAGGAGGCCGAGGCTGTTAGCGTTAGTGTGGTCCGAGGCAGAGATCTGAGGTTGCGGGACAAGTCTGTTAGGAGGAGAACCAGATCCATGTCTCCTCTCCGAAGCAACACGCCTTTGGAGTGGGCAGAGAACGAAGATGATCATATTGTTGGCGGGGATCATGACAATAACGTGAGCTCCGGGAAGCAAATGGAAGTTAGTTCCTTGGAAGCTGAGAAGCAAAGGGAGAACACAGAGGATGGTTTGAGTTTAGGTTTGGAGACAACTCCTTCGGTATCAGGTTCGGCTTCGTCCTCTCGGTCTTCTTCGGCTGGGAGAAGTTCGAAGAGGTGGGTTTTCTTAAAGGACTTTCTCAGAAGCAAAAGTGAAGGAAGAAGTAACAACAAGTTCTGGTCCAGCATTTCCTTCTCCCCAACCGCCAAAGATAAGAAACTCACCACTTCCACTGCTCAAACTCTCAATGTCCCAACAAACACCAAGAACGGGCCCTCTTCTTCTGAAGCCACGCACAAGTCCAAAGGAAGTAGCTCTCAGGCTTGGGCCCGGAGAATGAGCGGGAAGCCCACCAACGGTGTTGGGAAGAGGCGCGTGCCACCTTCACCACACGAGTTGCATTATAAAGCAAACAGGGCCCAAGCTGAAGAGTTGAGGAAAAAGACCTTTCTGCCCTATAGGCAAGGTCTGCTTGGGTGTTTGGGATTTAGTTCTAAGGGTTATGGCGCCATGAATGGCTTCGCCAGAGCCCTAAACCCTGTTTCTTCCAGGTAA 1200 0.52 MDQLQSATTYNAQKLNPQPPSNSTNGEPLYEDFDSTCSTPYISAPSSPGRGPHPGFFYSAPASPMHFAITAVSSYDKSPSSAPMGYEFEFSARFGSAGSAGSGSMSSADELFLNGQIRPMKLSSHLERPQVLAPLLDLEGEEEEEEAEAVSVSVVRGRDLRLRDKSVRRRTRSMSPLRSNTPLEWAENEDDHIVGGDHDNNVSSGKQMEVSSLEAEKQRENTEDGLSLGLETTPSVSGSASSSRSSSAGRSSKRWVFLKDFLRSKSEGRSNNKFWSSISFSPTAKDKKLTTSTAQTLNVPTNTKNGPSSSEATHKSKGSSSQAWARRMSGKPTNGVGKRRVPPSPHELHYKANRAQAEELRKKTFLPYRQGLLGCLGFSSKGYGAMNGFARALNPVSSR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g1454 399 PANTHER - 23 395 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 225 252 - -
Vra8g1454 399 Pfam Protein of unknown function (DUF1645) 108 367 IPR012442 -
Vra8g1454 399 PANTHER STRESS RESPONSE NST1-LIKE PROTEIN (DUF1645) 23 395 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 167 252 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 1 50 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 283 328 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 283 355 - -
Vra8g1454 399 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g1454 Vra-Chr8 31460422 31462100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g1454 - - gmx:100805542 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g1454 8 31460422 31462100 Vra8g1454 8 31460422 31462100 ECH
Vra3g0894 3 8988031 8996176 Vra8g1454 8 31460422 31462100 PCT