Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra8g0929 ATGGGTTGCTTTTTTGGTTGTTTTGGTTCCTCCAAACACTCAAACAACAAGCGCAAGGTTCTTAGAAATGGTAGTAGCAATGGCAAGCAAGAGCAACCTACTGTCTCTTTGGTTCCGGATTGCTCCAAAAATGCCGTTAACCCTATACCACAACTCCTGGAAAAAAGTGCGGAGCAACTGAGTGTAAGTAGCAGAAAGAAAGTGACATTTGATTCCAACGTGAAGACCTATGAACCTTCCTTGGTGGATGAAGTTGAAGAGAGGAAGAATGAGGATGTTGGAAAGGAGGAAGCTTTGGTTCATCCAAAGTCATCTTCCTCTGAAGATAATAGTTGTGTTTCTTCAACGGGGTCTTACCCACCCAACCATAGGTACCAGAATTGCCGGGACAGTGAGGACGAGGAGGAAGAGATTGATTATGGGGACAGTGATCTTAGTGATGAGGATGATGATGTCATCAGAGAAGAGTGCAAAGAATTGGGGCAGGACTTTGGAGAAGATGGCACGGTAGCAACTATTGCCGCTGATCATGTGTTTTCTGAAGAGGTTGATGTGAAGTCAATCGAGTCCAACCTCAATGCCAGAGACAGAAGTGCTTATGTTCATCCTGTACTGAAACCAGTGGAGAATCTCACTCAGTGGAAAGTTGTGAAGTCTAAGAAAACACCCTTAAGACCTCAGAAAGAATATGAGTTTGGGGAAGCTGTGGAAGAATCACCTTTCAGCTTGAAATCAGAAAGTGACACACCAAAGAAGTTGAACCAGGAGATCCCTGTTGATGCCAGCCTATCAAATTGGTTGGTCTCACCAGAGACTACACCTGTTAACAAGGCTGGCTCAGTGACTTTATTTCCTGGTACCCCTGACAGGAGCACCCCACAAAGTCCATATTCTGTGTTAAGTCACGAAGATAGGCCAATATTAGGTGCATTGACATTAGAAGAGATCAAACAATTTTCGGCTACTTCTTCTCCAAGGAAGTCACCTAGTAGGAGTCCAGATGAAATGCCTATTATTGGCACTGTTGGGACCTACTGGAATTTTGCAGCCTCATCGGAAGGTTCTGGCTCAGCTTCTTCCTTTAAAGGAATTCCGAACTCGACAAGCAAGTACAGAGAGGATAAGAGAGTGAATTGGCACTCAACCCCTTTTGAGACAAGATTAGAGAAAGCTTTGAATAGAGGTGCTGCTTCTTATGTTCCTCGTGTATTTTAG 1215 0.4412 MGCFFGCFGSSKHSNNKRKVLRNGSSNGKQEQPTVSLVPDCSKNAVNPIPQLLEKSAEQLSVSSRKKVTFDSNVKTYEPSLVDEVEERKNEDVGKEEALVHPKSSSSEDNSCVSSTGSYPPNHRYQNCRDSEDEEEEIDYGDSDLSDEDDDVIREECKELGQDFGEDGTVATIAADHVFSEEVDVKSIESNLNARDRSAYVHPVLKPVENLTQWKVVKSKKTPLRPQKEYEFGEAVEESPFSLKSESDTPKKLNQEIPVDASLSNWLVSPETTPVNKAGSVTLFPGTPDRSTPQSPYSVLSHEDRPILGALTLEEIKQFSATSSPRKSPSRSPDEMPIIGTVGTYWNFAASSEGSGSASSFKGIPNSTSKYREDKRVNWHSTPFETRLEKALNRGAASYVPRVF* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra8g0929 404 MobiDBLite consensus disorder prediction 270 299 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 60 76 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 60 150 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 11 41 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 104 125 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 11 43 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 80 103 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 132 150 - -
Vra8g0929 404 MobiDBLite consensus disorder prediction 229 254 - -
Vra8g0929 404 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 396 IPR039300 GO:0007142
Vra8g0929 404 PANTHER RRNA BIOGENESIS PROTEIN RRP36 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra8g0929 Vra-Chr8 20595083 20597077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra8g0929 - - gmx:100805024 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra8g0929 8 20595083 20597077 Vra8g0929 8 20595083 20597077 ECH
Vra8g0929 8 20595083 20597077 Vra3g0211 3 2416589 2418432 ECH