Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3558 ATGGGTATGTGGAAATTGAGATTTTTGGGGTTTCTTTGTGCCTATTTTCTCTTTACAATTGGTGCCGTGGAGCTGGGCAGGAACCAACCAACTGAAAGAATTTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCAGTGGGAAGGTTGAAGGTTTTTGTATATGAACTTCCAAGTAAGTACAATAAGAAAATTCTGCAAAAAGATCCGAGATGCCTCAACCATATGTTTGCTGCTGAAATCTTTATGCACCGGTTTCTCTTATCTAGCCCTGTCCGAACCCTTAATCCGGAAGAGGCTGACTGGTTTTATACCCCTGTATACACCACTTGTGACTTGACACCAAATGGCCTCCCTTTACCCTTCAAGTCACCACGAATGATGAGAAGTGCCATACAGCTTATTTCTTCAAACTGGCCTTATTGGAATCGCACAGAGGGGGCAGATCACTTCTTTGTGGTTCCTCACGATTTTGGGGCTTGTTTTCATTACCAGGAAGAGAAGGCAATTGAAAGAGGGATTCTTCAACTGCTAAGGCGTGCTACATTGGTTCAAACATTTGGACAGAGGAATCATGTTTGCTTGAAAGAGGGCTCAATTACCATTCCCCCATACGCTCCACCACAGAAAATGCACACCCACCTAATTCCTGATAAGACTCCCAGGTCCATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGAGGTGCAAGAGCAGCAGTGTGGGAGAACTTTAAGGACAATCCTCTATTTGATATCTCCACTGAGCATCCAACCACGTACTACGAGGACATGCAACGAGCTGTGTTTTGCCTATGCCCACTTGGATGGGCTCCTTGGAGCCCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTGTTATTATTGCAGATGACATTGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGAGATAGGAGTGTTTGTTGCTGAGGAGGAGGTTCCAAAGTTGGATACCATACTCACATCTATCTCACCAGAAGTCATATTAAGGAAGCAAAGATTGCTTGCTAACCCTTCCATGAAGCAAGCAATGCTTTTCCCACAGCCTGCTCAACCTGGAGATGCCTTCCATCAAGTTTTAAATGGACTGGCAAGGAAGCTGCCACATGACAACACCATGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACCTGTGGCTGACCTTAAACCTTGA 1248 0.4479 MGMWKLRFLGFLCAYFLFTIGAVELGRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLNHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILQLLRRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEEVPKLDTILTSISPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDNTMFLKPGEKILNWTAGPVADLKP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3558 415 Pfam Exostosin family 49 344 IPR040911 -
Vra7g3558 415 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 6 410 IPR004263 GO:0006486|GO:0016757
Vra7g3558 415 PANTHER IRX10L-LIKE PROTEIN, PUTATIVE-RELATED 6 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3558 Vra-Chr7 54948987 54952782 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3558 K20870 - gmx:100812747 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3558 7 54948987 54952782 Vra7g3558 7 54948987 54952782 ECH