Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3456 ATGCCCGTACGCCGTCTCAGACTCGATTCCGACACCGACGAAGAAGAACAACACCCACCCCAATCCCAACCCCTACCACGGCCACAGCCACAGCCGCAGCCACATTTTCCGGAGGTTCCCGTTGAAATCTCCGACGACGACTTCATCGACGTCGCTGAAAGCCTCTCTCCGCCCTCCCCTTCCTGTCCAGTCTTTGACTTCCTCCGCCGCCTCGGTCTGTCTCTCAAGAGAGGCTGGCTCGCTTCCTGTCTCCGCCAACTCCAAGTCTCTGTTACGTCCTTCGAACACCTCGACGTTGCCGCGAAAGCCAAACTTTGTTTGGAGCAGTTCCTTTTCGCCGACATGAATTTATGTGGCGCCGGCGTTCTCCCTCTTGGCGTCGATTCCATGCACCTTCGCGTTCTCCCTGGTCCCTACGTTTTGCAGGTTGATGAAATAATTAATATCACTTGTCCCCTACGAGGAAGATACGAACAAGCACCTCCTGGACCTAAGAGGTGCCTCAAGTTGTCAATGACTGACGGTGTTCAGAGAGTCTTTGGAATGGAGTATAGACCTATCAAAGCGCTTGAAGTTTGTGCCCCTTCTGGTTTAAAGGTTGCTATCTCTAATGTACATGTGCGTCGTGGACTTCTAATGTTGGTCCCTGAAACCATTGAAGTTTTGGGGGGATTGGTTGAGGAGCTGGATGCTGCTCGAAAACGACTGGTTGAAGAAATAAACAAGCCACCTAGGGGGAAAAGAAACAAAAATGGAGAGCTCCCTCCTTTAGCTACTAGAGCAACACTTGCTGCGTGGCCTCCAGGTGGGGTTGATAATCGTGCGTGCAATGGCTCCACACTGCACAGTACTGTTTCTTTCCAAGAAAACAACCAAGGTGCTGGCCGAAGCATACCTGGCACTATTAACAGCTTAACAACTGAAGATACTTTGTCCATGGGTGCACACAGTGCTCCTGCTAATTCAATACACCGCATGTCATCACATTCCATGGGTGCACACAGTGCTTTAACTACAGGTGCTGGCCGAAGCATACCTAGCACTGTTAACAGCTTAACAACTGAAGATACTTTATCCACGGATGCACACAGTCCTCCTGCTAATTCAATACACGGCATGTCATCACGTTCCAACGCCATGAATATGGATACGCCTAGGGATACCAATCCTGTATCCCATGCTAGTCCTATGTCTAACCGGCTCTCTTCTGTAATCTCAAAGGCCAAGGAGATGCACATAGATGCTTCTAATGCAAGGGAATGTTCTATTGACAATCAGTCTTCTAACATGGATTCAAATGTTGCAGCTGCACATATTGACACAGTTAATATAACACCAGAAAATTCTGTTGGTATTGAGTGCTCTCCTGTTGTTTACAATGTTGAGACAGATACAGATGGAACTCCTGTTGCTACAGATACTATTCTGCATAGAACCACATGCACTGCTTTAAATACTAGCGATGTCCAGATGGTCGATGCCCTTAACCATCCACTCATACTGTCTAGAGACCAAGAGGTTCCTTTCACATACATAGCTAGTTTGTCAGTCAAGTGGGCTAAAATGAAGGAGGAAGCTCCTTCCGTTCAGGGGAAAATCAAGTGCTTTTTGACTGGTGTAAAAGGATTCCAGTTTAAGAAAAGGACAACATATGAACTTCAGGCGTATGTAGACGATGGTAGCCTTATTTCTGAAATCCTTGTCGATCATAATGTTGTAGAGAAAGGAATTGGTTATTCTCCTGAGGAGGTAACTGCAGCTCTTTCTTCCCCTGACACAAAGATTGTCCACCAAATGAAAGATACAATGCGTAAATTTCAAGCATTTTTAGCAAACTTTGAGGGAATAATTCTTGTGGAGTTCAATAAAAAAAACCCCCTTCCACTTGCTCTAGAGATGAGTCAAGGTTGTCCTCAGTCTGATGCATGGTTACTTCTGAGAAGGCTGAAGTCTCTTCAACCTCCACTAGTTCAAAACCCTACGGATCCGATTGAATTATCCCCGTAA 2007 0.4654 MPVRRLRLDSDTDEEEQHPPQSQPLPRPQPQPQPHFPEVPVEISDDDFIDVAESLSPPSPSCPVFDFLRRLGLSLKRGWLASCLRQLQVSVTSFEHLDVAAKAKLCLEQFLFADMNLCGAGVLPLGVDSMHLRVLPGPYVLQVDEIINITCPLRGRYEQAPPGPKRCLKLSMTDGVQRVFGMEYRPIKALEVCAPSGLKVAISNVHVRRGLLMLVPETIEVLGGLVEELDAARKRLVEEINKPPRGKRNKNGELPPLATRATLAAWPPGGVDNRACNGSTLHSTVSFQENNQGAGRSIPGTINSLTTEDTLSMGAHSAPANSIHRMSSHSMGAHSALTTGAGRSIPSTVNSLTTEDTLSTDAHSPPANSIHGMSSRSNAMNMDTPRDTNPVSHASPMSNRLSSVISKAKEMHIDASNARECSIDNQSSNMDSNVAAAHIDTVNITPENSVGIECSPVVYNVETDTDGTPVATDTILHRTTCTALNTSDVQMVDALNHPLILSRDQEVPFTYIASLSVKWAKMKEEAPSVQGKIKCFLTGVKGFQFKKRTTYELQAYVDDGSLISEILVDHNVVEKGIGYSPEEVTAALSSPDTKIVHQMKDTMRKFQAFLANFEGIILVEFNKKNPLPLALEMSQGCPQSDAWLLLRRLKSLQPPLVQNPTDPIELSP* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3456 668 MobiDBLite consensus disorder prediction 325 374 - -
Vra7g3456 668 MobiDBLite consensus disorder prediction 1 40 - -
Vra7g3456 668 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 61 652 - -
Vra7g3456 668 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 61 652 - -
Vra7g3456 668 MobiDBLite consensus disorder prediction 1 20 - -
Vra7g3456 668 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 508 649 IPR032199 GO:0000166
Vra7g3456 668 Gene3D - 114 240 IPR042470 -
Vra7g3456 668 SMART DUF1767_2 65 158 IPR033472 -
Vra7g3456 668 MobiDBLite consensus disorder prediction 21 37 - -
Vra7g3456 668 Pfam RecQ mediated genome instability protein 70 235 IPR013894 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3456 K10990 - gmx:100803734 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3456 7 53941111 53945305 Vra7g3456 7 53941111 53945305 ECH