Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3455 ATGTCGTCTGAAACCCTAGAAAACGAGAGGCCTCAAGCGAAAGAAGAAGTTCAAGATGAGGAAAATCACACTAAACAAGAAGATACTTCCATGAAGAAGGACGTGAGTGAAAACGGAAACGTAAAAGAAGAGACTGATGAGCCTGGCGAAGCGAAGTCTAGCAAGTCAGCAGAAGAAAGCGATTACACTACGCCAACTAGTAAGAGACCAACTAGGGAGAGGAAAACAGTGGATAGGTACACTGCTTCTTCGACCGATAAGTTTCACAAGGCTTCCTCTCTCAAAGCTTCGACAATTGAAAAGGGCAACGGTACGCAGCTCAAGGACATTCCAAATGTGGCTTTCAAGTTATCAAAGAGAAAAGCTGATGAGAACCTGCATGCGCTTCATAAAATACTCTTTGGGCAAAGGGGAAAGGCAAACGCAGTAAAGAGAAATATAGGACTGTTTTCTGGCTATGTGTGGACTGACAATGAGGAAAAACAGAAAGCAAAGGCAAAGGAGAAGATCGAGAAATGTGCGAAAGAAAAGTTGGTGGACTTCTGTAATGTGCTTAATATTCCGATAAATAAGACCACTATGAAGAAAGAAGAACTGTCTGGAAAGTTGTTTGAATTTTTGGTGTCCCCGCATGCTACAACTGATGTTCTTCTAGCCGACAAAAAAATGAAAGGTAAAAAGCGAGGCAGAAAGCCAACCCCAAACAAATCCGAAACACCTGCCAAGAAGCAAAAGAAAACCTCACTAGTTCGGAAAAAGCAAAAGCAGTCTTCTGATGTCGAGGAGAGTGATGTCTCTGAACCTTCCGAGGCAGAAGTTGATTCTGAGGAAAATGATGTTCCAAAAAGTGTAAGTGATCATGATGACGAAAACATGTCAGAGAAAGAGGAAGATAAAGAAAAGGTTCACAATGGGTCTTCGAGGAAGACTCTGAATGAAGACCAAGACGAACCAGTAAAGAAGACTACTACAGTAGAGACAGCCAAGAGCAATGAAAAAACTCCAAAACGATCTACTTCAAAAATAGCTCGTAATAACCAGAATTCGAAAGGGAAGGTTGCAGACAAAAAACGAACCGACAAGTCTTCAAAGGCTTTAGTTAAGGATGGAGGAAAAGGTAAAAGTAGCGAGAAAGCTGAAGACGGACCTAGTAAGAATGAAATGCATCGAGTGGTAGTTGATATTTTAAAGAAAGTAGATTTCAATACGGCAACTTTATCCGATATCCTGAAACAACTTGGTACTCATTTTGATGTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATTAATAACATGTCAGATAATGATAAGGAGGAAGCATCAAATGATGGAGATGATGACGGTGAAGACGAGGCATTGTAG 1383 0.4064 MSSETLENERPQAKEEVQDEENHTKQEDTSMKKDVSENGNVKEETDEPGEAKSSKSAEESDYTTPTSKRPTRERKTVDRYTASSTDKFHKASSLKASTIEKGNGTQLKDIPNVAFKLSKRKADENLHALHKILFGQRGKANAVKRNIGLFSGYVWTDNEEKQKAKAKEKIEKCAKEKLVDFCNVLNIPINKTTMKKEELSGKLFEFLVSPHATTDVLLADKKMKGKKRGRKPTPNKSETPAKKQKKTSLVRKKQKQSSDVEESDVSEPSEAEVDSEENDVPKSVSDHDDENMSEKEEDKEKVHNGSSRKTLNEDQDEPVKKTTTVETAKSNEKTPKRSTSKIARNNQNSKGKVADKKRTDKSSKALVKDGGKGKSSEKAEDGPSKNEMHRVVVDILKKVDFNTATLSDILKQLGTHFDVDLMHRKAEVKDIITDVINNMSDNDKEEASNDGDDDGEDEAL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3455 460 PANTHER OS01G0924900 PROTEIN 340 457 - -
Vra7g3455 460 PANTHER OS01G0924900 PROTEIN 9 349 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 437 460 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 1 84 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 65 84 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 275 339 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 350 388 - -
Vra7g3455 460 Pfam DEK C terminal domain 383 435 IPR014876 -
Vra7g3455 460 MobiDBLite consensus disorder prediction 446 460 - -
Vra7g3455 460 Coils Coil 156 176 - -
Vra7g3455 460 Coils Coil 3 23 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 8 57 - -
Vra7g3455 460 Gene3D - 374 438 - -
Vra7g3455 460 MobiDBLite consensus disorder prediction 218 388 - -
Vra7g3455 460 SUPERFAMILY DEK C-terminal domain 377 437 - -
Vra7g3455 460 PANTHER DEK PROTEIN 340 457 IPR044198 GO:0003677|GO:0006325
Vra7g3455 460 PANTHER DEK PROTEIN 9 349 IPR044198 GO:0003677|GO:0006325
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3455 Vra-Chr7 53930397 53934761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3455 K17046 - gmx:100785644 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3455 7 53930397 53934761 Vra7g3455 7 53930397 53934761 ECH