Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3453 ATGGATGTCTGCGTAAAAGAAGAAGTGTCGGAGACTCCAATTATAACTAAGAGGAAATCGCGACCCGGCGCGGTGCCTCCTCCTGACTCCGTCATCGAAGTCAGCAGCAGCGACAGCGATTCGGAGAACGAGGACGTTCATTCGGAGAACGGAGGAAGTCCTTCCAAAAAGCGGAGAACCTATGCTGAAACGGTTTTGCCTGTTGGATTCCTCAGCCCTCTCCCTCCGGAGGCCTCTCCACCCACTGATCTGCTGGCTTTGCCGGCGCCAGAGTGGGCTTCTAATTCCGCATCACGATCCAATTTGTATACTACACTGGGAGTGAATAGCTCCAAGCAGTTCTGGAAGGCTGGGGATTACGATGGTGCCGGCTGCGGTGGTTCTGATTCTTCATCAGTTGGTATGGATCATGTCAGAGTTCACCCCAAGTTTTTACACTCTAATGCCACAAGCCACAAGTGGGCTCTTGGAGCTTTTGCTGAGCTTTTGGACAATTCATTGGATGAGGTTTGTAATGGGGCGACATACGTTAATGTAGATATGCTTATAAATAAGAAAGATGGCTCCAGGATGTTGCTGATTGAAGATAATGGTGGTGGGATGGATCCTGAAAAAATGCGTCAATGCATGTCACTGGGGTATTCTGTGAAAAGCAAATTGGCGAACACAATTGGACAATATGGAAATGGCTTTAAGACAAGTACCATGAGGCTAGGGGCTGATGTAATTGTTTTCTCCCGTTTTCCAGGGAAAGATGGGACAAGCTCTACTCAAAGCATAGGCTTGCTGTCTTACACATTTTTGAGGAGTACGGGAAAAGAAGACATTGTAGTACCCATGTTGGACTATGAAAGAAGAGGACAACAATGGAATAAGATAATACGAACTACTCTGGATGATTGGAATAAAAATGTTGAAACAATGGTACAGTGGTCACCATTTTCTGATGAGGCTGATCTTCTTCGACAGTTCAACTTGGTGAAAGATCATGGTACCCGAGTGATTATATACAATCTTTGGGAAGATGACCAAGGCCAACTGGAACTTGATTTCGATGCTGATCCACATGATATCCAAATAAGAGGTGTTAATCGAGATGAGAAAAACATACAGATGGCTAAAGAATTTCCAAATTCTCGACATTTTTTGACCTATCGGCATTCACTAAGGAGTTATGCTTCGATTTTATATCTGAGGCTTCCTTCTGCCTTCCGAATTATTCTTCGCGGGGAAGATATTTTGCATCACAACATAGTGAATGATATGATGATGTCTCAGGAGGTGACCTACAAGCCTCAAGCTGGAGTTGATGGGCTTCTTCCCAAGGACTCAAATATGATTGCTGTTGTTACCATTGGATTTGTGAAGGATGCAGTTCACCATGTTGATGTTTCAGGTTTTAATGTTTATCATAAGAATCGACTCATTAAGCCTTTCTGGAGGATCTGGAATCCAGCTGGAAGTGGAGGACGTGGGGTCATTGGTGTCTTGGAAGCCAATTTTGTTGAACCTGCTCATGATAAACAAGGCTTTGAGCGTACATTAGTTTTATCAAGACTGGAGTCTAAATTGATACAAATGCAGAAAAAATACTGGGGCGCTAACTCCCATAAAATTGGTTATTCCAATCGAAATAAAATACAAATAAGAGATTCTGGTGATAAAGACACATCTCCTGCTTATGTTCCAGAACCATCAAAATCAAAAAGGAAATATTCTACCATGGATGGCAAGGTAACGCCGTTGACATCAGACAAATTGCATTCACAACCAAATCAGAAACGGATGCAAAAACAAACAGAAAAAGATAGTGCATTTATTAATGGCCGATCTCCTGTTTCTCCTCCTAAACATATAATACAAAGTTCATCCGAAGAATCATCCTCTGATGATGATGTCAGTGAGGATCTCTTGCCTAAAGGAAAAATTCAGAAGGCGTCTACCGCTGAGAAATCAAAAGTTCAGAAGGCATCTACCGCTGAGAAATCATTTGAAAATGAGAATGGAGACACTACATCAAATAGAAAAGCCTCGCCTCACACACGGGCATCTGCATCCAAGATAAAGGGAAAGGATGTAAATAATAGCGACCAACCACTACCTGACAGTGATTTACTGACATCCGACCAATTGAGGAAAGAGAACCGTGAGTTGAAGGAAAGATTACAGAGGAAGGAAGAGGAAATTTTAGAATTGTCTCAAGCTTTGCAGCATGACAAAGACAAGTGTAAATCTCTCGAAACTCAGCTAAACGAGTCAGAAAAAAAGATTGAAGAGTTGAACCATGATCAAGAAACTCTCATTGATATATTCTCTGAAGAGAGGGAAAGACGTAATGCTGAAGAGAAAAATCTAAGAAAGAAGCTTCAGGAGGCATCGAATACTATCCAAGAGCTGCTTGACAAGATACGGGTACTTGAAAAGAAGTCTACAAGTGGCAAACTAGAACGATAA 2454 0.4218 MDVCVKEEVSETPIITKRKSRPGAVPPPDSVIEVSSSDSDSENEDVHSENGGSPSKKRRTYAETVLPVGFLSPLPPEASPPTDLLALPAPEWASNSASRSNLYTTLGVNSSKQFWKAGDYDGAGCGGSDSSSVGMDHVRVHPKFLHSNATSHKWALGAFAELLDNSLDEVCNGATYVNVDMLINKKDGSRMLLIEDNGGGMDPEKMRQCMSLGYSVKSKLANTIGQYGNGFKTSTMRLGADVIVFSRFPGKDGTSSTQSIGLLSYTFLRSTGKEDIVVPMLDYERRGQQWNKIIRTTLDDWNKNVETMVQWSPFSDEADLLRQFNLVKDHGTRVIIYNLWEDDQGQLELDFDADPHDIQIRGVNRDEKNIQMAKEFPNSRHFLTYRHSLRSYASILYLRLPSAFRIILRGEDILHHNIVNDMMMSQEVTYKPQAGVDGLLPKDSNMIAVVTIGFVKDAVHHVDVSGFNVYHKNRLIKPFWRIWNPAGSGGRGVIGVLEANFVEPAHDKQGFERTLVLSRLESKLIQMQKKYWGANSHKIGYSNRNKIQIRDSGDKDTSPAYVPEPSKSKRKYSTMDGKVTPLTSDKLHSQPNQKRMQKQTEKDSAFINGRSPVSPPKHIIQSSSEESSSDDDVSEDLLPKGKIQKASTAEKSKVQKASTAEKSFENENGDTTSNRKASPHTRASASKIKGKDVNNSDQPLPDSDLLTSDQLRKENRELKERLQRKEEEILELSQALQHDKDKCKSLETQLNESEKKIEELNHDQETLIDIFSEERERRNAEEKNLRKKLQEASNTIQELLDKIRVLEKKSTSGKLER* 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3453 817 MobiDBLite consensus disorder prediction 40 56 - -
Vra7g3453 817 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 157 348 IPR036890 -
Vra7g3453 817 Coils Coil 708 809 - -
Vra7g3453 817 MobiDBLite consensus disorder prediction 707 723 - -
Vra7g3453 817 MobiDBLite consensus disorder prediction 1 15 - -
Vra7g3453 817 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 157 260 - -
Vra7g3453 817 Gene3D - 142 344 IPR036890 -
Vra7g3453 817 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 1 802 IPR045261 GO:0016887
Vra7g3453 817 MobiDBLite consensus disorder prediction 543 723 - -
Vra7g3453 817 MobiDBLite consensus disorder prediction 688 705 - -
Vra7g3453 817 MobiDBLite consensus disorder prediction 1 59 - -
Vra7g3453 817 MobiDBLite consensus disorder prediction 661 681 - -
Vra7g3453 817 PANTHER PROTEIN MICRORCHIDIA 7 1 802 - -
Vra7g3453 817 Pfam Morc6 ribosomal protein S5 domain 2-like 387 532 IPR041006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3453 Vra-Chr7 53884306 53913885 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3453 - - gmx:100786679 1191.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3453 7 53884306 53913885 Vra7g3453 7 53884306 53913885 ECH