Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3448 ATGGCCATGCATCGCGAGTCTTGGGCTTTTGTATTCGGTCTTTTGGGCAACATCATCTCCTTTGGAGTGTTTCTTGCTCCATTGCCAACGTTTTACCAAATCTTCAAGAAGAAATCCACTGAAGGGTATCAGTCACTTCCTTATGTTGTTGCACTGTTCAGTGCAATGCTCTGGATTTACTATGCATTCGTGAAAAGGGAAGCTGCTCTTCTTCTCATTACCATTAACACGTTTGGAATTGTTGTGGAATCAATTTACCTTACAATCTTCCTAATTTACGCTCCAAGGAAGCCTAGGCTTACGACCATCAAGCTTCTTCTCTTGCTGAATGTGTTTGGCTTCGGAGCCATGCTTCTGGCAACTCTCTACCTGTCCAAGGGAGCAAAGCGTCTTGCCATCATAGGATGGATTTGTCTTGTTTTCAACATCAGTGTCTTTGCTGCACCTCTCTTCATTATTAGGCGAGTGATTAAGACAAGGAGCGTGGAATACATGCCATTTACCTTGTCCATGTTTTTGACCATCAATGCTGTTATGTGGTTCTTCTACGGCCTTCTTCTCAGGGATTATTATGTTGCTCTCCCAAACACACTTGGGTTTCTGTTCGGCATAATTCAGATGGTGATGTATTTGATGTACAGAAACGCCACCCCGGTTGCACTAGATGAGCCGGTGAAGGCTCAAGAAGCGAATGGCCACATAATTGGAGCTGTGAAGATGGGAACAATAGAGCCAAACCATGGAGGTGCTGGTCTTGGTGGTGTTGGCAAAGTCTGA 777 0.4466 MAMHRESWAFVFGLLGNIISFGVFLAPLPTFYQIFKKKSTEGYQSLPYVVALFSAMLWIYYAFVKREAALLLITINTFGIVVESIYLTIFLIYAPRKPRLTTIKLLLLLNVFGFGAMLLATLYLSKGAKRLAIIGWICLVFNISVFAAPLFIIRRVIKTRSVEYMPFTLSMFLTINAVMWFFYGLLLRDYYVALPNTLGFLFGIIQMVMYLMYRNATPVALDEPVKAQEANGHIIGAVKMGTIEPNHGGAGLGGVGKV* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3448 258 Gene3D - 11 97 - -
Vra7g3448 258 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Vra7g3448 258 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Vra7g3448 258 PANTHER RAG1-ACTIVATING PROTEIN 1 4 246 - -
Vra7g3448 258 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 246 - -
Vra7g3448 258 Gene3D - 129 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3448 Vra-Chr7 53819120 53821450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3448 1 245 Miscellaneous Gene Families AT5G50800 56.911 6.26e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3448 K15382 - gmx:100805676 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3448 7 53819120 53821450 Vra7g3448 7 53819120 53821450 ECH