Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3446 ATGTCGTTGCCGCCGCCGCCGGCAAATTCAGATTCCGCCGATACCTCCGCTCCGTCGCTGGTCAGAACTTATCGCGTCTGGCAAGGCAGTAACGTTTTTCTTTTCGGAGGGAGACTCATATTTGGGCCTGATGTGAAATCAATATTTATATCGGTTTTTCTTATTATTGTTCCCATCGCGGTTTTCTGTGGTTTGGTAGCGAGGAAATTGTTGGATGATTTTCCTCATCACTCTGGATGGTCAATAATGGGTGTGGTTATCGCTCTCACACTGTTTGTTCTAATCACCCTTATAGTAACCTCAGGAAGAGATCCTGGCATAGTACCTCGTAATGCTCATCCTCCGGAGCCAGATGACTATAATTGGACTGAGAATAGCAACAATGGGCAAATTTCAACCTCACGATTTCCACGGACAAGGGATGTAATTGTCAATGGTATAACAGTGAAAGTCAAATATTGTGATACTTGCATGCTCTACAGACCCCTCCGTGCTTCTCACTGTTCAGTCTGTGATAACTGCGTAGAGCGATTTGATCATCACTGCCCATGGGTGGGTCAGTGTATTGGACTGCGAAATTACCGGTTCTACTACATGTTTGTTTTCTCAGCCACTCTGCTTTGCTTGTATGTACATGCCTTTTGCTGGGTTTACATTGTAAGGATCAAGGACTTTGAGAAAATATCAATTTGGAAAGCAATGTCCAAAACTATAGCATCCACTGCACTAATAATCTACACCTTCGTTTGTGTCTGGTTTGTTGGCGGCCTCGCTGTTTTCCACACGTACCTCATCAGCACAAACCAGTCTACTTACGAAAATTTTAAATACCGGTATGACCCTCAAACCAACCCATACAACAGAGGGATATTGAACAACTTCAAAGAAGTGTTCTGCTCTAGGATTCCTCCGTCCAAGAACAATTTCAGGTCTAAGGTTCCAAGGGAGCCATTAGATTCATATCGAAGAACGGACATCAGGCCCTTAAGCCCATTGATGAAAAGAACCACCGGGCATATGGAATTATTAGTTGGGAATTCAGTTTATAATGAGCATGAAGAGGAGGAAAGTCATCATAGAGATGGGTCTGAGAATGAAGCACGTAGCAAGGATAGTGAAAGCAAAGACAGTGGATTGACCGATAAGTCCGTAGATTTAAGCAGGATCTTTCACACTGAAGGAGTAGAGGGCCAAGAAAGTTCAGTTGGCAGACACCCTCCATGGGATCCAACTCCACAAGTTCCTGATAGGATAATCGAAGTTGGGGAATCAAATTGGACTACTGGGCCCAGATACTCCACTCAAGAGACTTTATAG 1317 0.4404 MSLPPPPANSDSADTSAPSLVRTYRVWQGSNVFLFGGRLIFGPDVKSIFISVFLIIVPIAVFCGLVARKLLDDFPHHSGWSIMGVVIALTLFVLITLIVTSGRDPGIVPRNAHPPEPDDYNWTENSNNGQISTSRFPRTRDVIVNGITVKVKYCDTCMLYRPLRASHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCLYVHAFCWVYIVRIKDFEKISIWKAMSKTIASTALIIYTFVCVWFVGGLAVFHTYLISTNQSTYENFKYRYDPQTNPYNRGILNNFKEVFCSRIPPSKNNFRSKVPREPLDSYRRTDIRPLSPLMKRTTGHMELLVGNSVYNEHEEEESHHRDGSENEARSKDSESKDSGLTDKSVDLSRIFHTEGVEGQESSVGRHPPWDPTPQVPDRIIEVGESNWTTGPRYSTQETL* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3446 438 MobiDBLite consensus disorder prediction 351 389 - -
Vra7g3446 438 Pfam DHHC palmitoyltransferase 151 277 IPR001594 GO:0016409
Vra7g3446 438 ProSiteProfiles DHHC domain profile. 152 202 - -
Vra7g3446 438 PANTHER S-ACYLTRANSFERASE 15 434 - -
Vra7g3446 438 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 15 434 - -
Vra7g3446 438 MobiDBLite consensus disorder prediction 351 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3446 Vra-Chr7 53786170 53790468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3446 85 332 Lipid Metabolism Gene Families AT4G22750 29.502 1.30e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3446 - - gmx:100788304 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3446 7 53786170 53790468 Vra7g3446 7 53786170 53790468 ECH