Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3442 ATGGCCGAGATTCAGCCGCCGGAGGGTCAAATAAACGGTGCCGGTGGAACCCTAATTCTTCACTCCTTGGAGCCCGCCATCGGATCCAAACGACAACGCCGTCCAAGCGTCCGATTGGGCGATATCGGTGGTGACCAGCCCTATGATTCCACGCGCCGCAACACAAAGCCTTGGAAACTCGCCTTCGATGGCCATCATCACCACCACCACCGCAACAAGGACAAGGACCCAGGTAAACCTTCCAAGACTCGTCCTTTAACGAACTTGAGCGAGTTTAACGAAACCCTAGAAGTCTCGAACGAGCGAGAAGCCGGGAACGTGGACTCTGTTGCAATTGGCAGCTGGAAGGTGAAGGAGTCCAAGAAGAGGGGCTCTGTGGCCACCAAAAGGGTCAGATCGAATTGGGTTTCGCGAATCGAGGACGGTGGCGGGGACAATGGCGGCGGAGAAGGGGAGGGAGAGAAGTATAATAACGGGGACGAAGATGGCGAGGATGATGATGGGTATCGAGAATTTGAGGTTGAGAATTCGGAGAGCCCTTTGAAGGAGCAAAGCCCTATTCATAGCATGGAGAATTTGGCGGTTGATGGGCATAGGAGGGTTTTTAAGGGTAGGGAAAGGGAGCAACAGCATGATGGGGTTGAGCTATCTGCACCTTCTGATAATGATGTTAGGGATTGGAAGTGCGGGGATAGGAATAATGAGAATGGTGGTGGAAGGGTTAGGGGTGGTGAAGATGGTGTTAGGGTTTGGCTTAATGGACTGGGGTTAGGCAGATATGCTCCCGTGTTTGAAGTGCATGAGGTGGATGATGAGGTTTTGCCCATGCTGACTCTAGAGGATCTCAAAGATATGGGGATTAGTGCTGTTGGGTCCAGGAGGAAAATGTACACGGCCATTCAGAAGCTCGGTAAGGGCTTCTCCTGA 927 0.5243 MAEIQPPEGQINGAGGTLILHSLEPAIGSKRQRRPSVRLGDIGGDQPYDSTRRNTKPWKLAFDGHHHHHHRNKDKDPGKPSKTRPLTNLSEFNETLEVSNEREAGNVDSVAIGSWKVKESKKRGSVATKRVRSNWVSRIEDGGGDNGGGEGEGEKYNNGDEDGEDDDGYREFEVENSESPLKEQSPIHSMENLAVDGHRRVFKGREREQQHDGVELSAPSDNDVRDWKCGDRNNENGGGRVRGGEDGVRVWLNGLGLGRYAPVFEVHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYTAIQKLGKGFS* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3442 308 MobiDBLite consensus disorder prediction 25 193 - -
Vra7g3442 308 Gene3D - 243 303 IPR013761 -
Vra7g3442 308 MobiDBLite consensus disorder prediction 83 102 - -
Vra7g3442 308 Pfam SAM domain (Sterile alpha motif) 247 303 IPR001660 GO:0005515
Vra7g3442 308 PANTHER SCP160 18 308 - -
Vra7g3442 308 CDD SAM_superfamily 248 302 - -
Vra7g3442 308 MobiDBLite consensus disorder prediction 205 224 - -
Vra7g3442 308 MobiDBLite consensus disorder prediction 157 172 - -
Vra7g3442 308 PANTHER - 18 308 - -
Vra7g3442 308 ProSiteProfiles SAM domain profile. 243 306 IPR001660 GO:0005515
Vra7g3442 308 SUPERFAMILY SAM/Pointed domain 246 303 IPR013761 -
Vra7g3442 308 SMART SAM_4 240 306 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3442 Vra-Chr7 53743471 53744975 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3442 - - gmx:100802147 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3442 7 53743471 53744975 Vra7g3442 7 53743471 53744975 ECH