Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3429 ATGGGCAAGGAGAGCCAAGTGTCTGCTATGGAAATCGACGCTCCGAAACCGGATAGTTCCGATCAGATCGTTCCCAAATTCTCCGTTAACGTGCTGCAATTGTTGAAATCGGCTCAAATGCAGCATGGCTTGCGCCACGGAGATTACACTCGTTATAGGAGGTATTGCACAGCTCGTTTGAGGAGGTTGTATAAATCGCTGAAGTTTACCCATGGTCGTGGCAAATATGCTAAAAGGACCATAACTGAATCCACTGTCTCTGAAGTAAGGTTTCTTCATCTAATTCTGTATACAGCAGAGAGAGCTTGGAGTCATGCCATGGAGAAAAGGCAGCTTCCAAATGGTCCAAATGCAACTCAACGTATATATTTGATTGGTAGGTTGCGGAAAGCGGTAAAATGGGCTACTTTGTTTTCACAATTGTGTGCTGTCAAGGCAGATTCTAGAACATCTTTGGAAGCTGAGGCTTATGAGTCCTATATGAAAGGGAGTTTGTTGTTTGAGCAAGATCAGAATTGGGACGTGGCTTTAAAGAACTTCAAAAGTGCTAGGGCTGTATATGAGGAATTAGGGAAATATGGAGATCTGGATAACCAAGTTTTGTGTCGTGAACGAGTTGAGGAGCTAGAACCTAGTATCCGATACTGCCTTCACAAAATTGGCCAGTCAAATCTACAGGCCTCTGAACTTTTACAAATTGGTGACGTGGAAGGTCCTGCACTAGACCTTTTTAAAGCAAAACTAGAGGCTGTAATGGCTGAGGCAAGATCTCAACAAGCTGCTTCCATGACAGAATTCCTGTGGCTTGGCCACAGATTTCCTATATCAAATGCCAAAACAAGGGTTTCCATCCTGAAAGCTCAGGAGTTGGAGAAAGATATACATGGTCCATCGGCAGACTCAATTCCAGCAGACAAAAGACTAGTTATTTTTGACAAAATCTTTTCTGCATATCATGAAGCCCGAGGCTATATTCGGGCTGATTTGGCCACTACAGGAAGTGCAGAAAGTGTGAAAGATGATTTGAATGGTCTGGATAAGGCTGTGAGTGCTGTACTTGGAGAAAGAACCATTGAACGCAACCTATTGTTGGTTAAGGTTGCAAAAAGCAAACTAGCAAAGCGGCATGATGATAAAAATGAAAAAGTCACCAAACCTGAAGAGCTTGTTCGCTTATATGATCTCTTGCTACAGAATACAGCTGATCTATCCGATTTAGTCAGTTCTGGAAGGGATAAAAAACCAGAAGAAGTTAGCTTTGCTGAAGTGTGTTCATGCAAAAGTTTGGCTTTTCGAGCTCAGAGGTGCTTTTATGTTGCGAAGTCATACAGTGTGGCTGGGATGAGGGCTGAAGCATATGCATTGTACTGCCGTGCTCGCAATTTGGCTGATGATACTTTAAAAAAGTTTCAAATGTTAGATGGTGATAATAAGACTATGATTAAAGAGTTGGAGGACTTGTGCAACGAGTGCCGATCTAACACTTGTATTGAGCATGCGTTGGGGATCATAGAGGAAACAAAGACTCAAGAGAATCTATCTGAAAAGGTCTCCAATATATCATTGACCGGAACTGAGCGGTTGGAGAAATTCCTTCTTGAGAAACTTGAAGTTTATGAGTCTGCTGTGGGTGATTCAAATGTGAAGTGTACACCACGCATTACAGGCTTCCCTCCATCTTTCGAGGCAATTTCACGAAATCCTATTGTGCTGGATCTGGCTTATAACATGATTGAATTCCCATCTATTGAAAATAGGATGAAGAAGGATAGAAAAGCCAAAGGCGGCTTTATCAGTAGAATATTTGGATAG 1812 0.4222 MGKESQVSAMEIDAPKPDSSDQIVPKFSVNVLQLLKSAQMQHGLRHGDYTRYRRYCTARLRRLYKSLKFTHGRGKYAKRTITESTVSEVRFLHLILYTAERAWSHAMEKRQLPNGPNATQRIYLIGRLRKAVKWATLFSQLCAVKADSRTSLEAEAYESYMKGSLLFEQDQNWDVALKNFKSARAVYEELGKYGDLDNQVLCRERVEELEPSIRYCLHKIGQSNLQASELLQIGDVEGPALDLFKAKLEAVMAEARSQQAASMTEFLWLGHRFPISNAKTRVSILKAQELEKDIHGPSADSIPADKRLVIFDKIFSAYHEARGYIRADLATTGSAESVKDDLNGLDKAVSAVLGERTIERNLLLVKVAKSKLAKRHDDKNEKVTKPEELVRLYDLLLQNTADLSDLVSSGRDKKPEEVSFAEVCSCKSLAFRAQRCFYVAKSYSVAGMRAEAYALYCRARNLADDTLKKFQMLDGDNKTMIKELEDLCNECRSNTCIEHALGIIEETKTQENLSEKVSNISLTGTERLEKFLLEKLEVYESAVGDSNVKCTPRITGFPPSFEAISRNPIVLDLAYNMIEFPSIENRMKKDRKAKGGFISRIFG* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3429 603 PIRSF SRP68 27 596 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vra7g3429 603 PANTHER SIGNAL RECOGNITION PARTICLE 68 KDA PROTEIN 15 601 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vra7g3429 603 CDD SRP68-RBD 30 218 IPR034652 GO:0003723
Vra7g3429 603 Pfam RNA-binding signal recognition particle 68 44 578 IPR026258 GO:0005047|GO:0005786|GO:0006614|GO:0008312|GO:0030942
Vra7g3429 603 Gene3D - 26 222 IPR038253 GO:0003723
Vra7g3429 603 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3429 K03107 - gmx:100816486 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3429 7 53589516 53597410 Vra7g3429 7 53589516 53597410 ECH