Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3173 ATGTCATCTTGTTTTCTTGCCAATTCCATCACTGATATCAAAGTCCCTAAATGCACGCAAGTTTATTTTCCTTTGGTGAGTGAACCAAACATGGCAGAATCCTCCAAGGCGGTCAGTTTAACTGTTGAACAGGAACAACCTGAAGCAAAGCCTCCTCACGAGGGTATGTTTCTGGTCTTGACATATCTTCCTGTGTACGAGGTTGTGCTCATGTCTCAGGTTTGCACATCAATGAGAGATGCAGTCAACAATGACATATTACCATGGTTGAATGTTACTGTTGAACGGCCTCTCAATTGGCGACTCAACGATGAGATTCTATTTAAAGTCACCTCTAAGGCCAATGGTAACCTCAAAACTCTCACTCTCATAAGCTGCGCGCGTGTTACCGATGAAGGGCTCCAGAGGGTCGTGGAACAAAACCCTCTCATAAACAAGCTGCGTATACCAGGGTGCACAGGTATAACCCCTGAAGGAGTTCTCAGAGCCGTGAAAACATTATGCCAAAAAAGCAATTGCTTGAAGACCTTAAGTATAAATGGCATTTACAACGTACAGAAGGATCATCTTGACATGCTTATCATGAACCTGAGAAAGAATCAACCAACAGAGGAGCAGCAAAAGCAGCAGCCCGTCTACTATCATGAACGAGGTAGCCTTTCGGTATTTAAGCATGAAGAGAGCCAACGGTTCATTGATTTGGATATATGCCCCAGGTGCTCTGAGGTGAGGATGGTTTACGATTGCCCCAGAGAGCCTTGCACGAGGAGGGAATGGCCACTATCCCCATGTAGGGGTTGCAAATTTTGTATTCCAAGGTGTGAAAACTGTGGTGGATGCATCGAATCCGGAGAAGTGGAAGAGGGAGCTTGTGAAGATATATTCTGCCTTGAATGTTGGTTACAGCTTCCCAAATGCAGCTTCTGTAACAAACCATACTGTAAGCAACACTCAAATTGGTGGTGCACTTCTTCAGACTCTTCATTGATCTGTAAAGTTTGCGATGAAAACTCTCACGGATATACCTATACTGATGTTCTATAA 1044 0.4416 MSSCFLANSITDIKVPKCTQVYFPLVSEPNMAESSKAVSLTVEQEQPEAKPPHEGMFLVLTYLPVYEVVLMSQVCTSMRDAVNNDILPWLNVTVERPLNWRLNDEILFKVTSKANGNLKTLTLISCARVTDEGLQRVVEQNPLINKLRIPGCTGITPEGVLRAVKTLCQKSNCLKTLSINGIYNVQKDHLDMLIMNLRKNQPTEEQQKQQPVYYHERGSLSVFKHEESQRFIDLDICPRCSEVRMVYDCPREPCTRREWPLSPCRGCKFCIPRCENCGGCIESGEVEEGACEDIFCLECWLQLPKCSFCNKPYCKQHSNWWCTSSDSSLICKVCDENSHGYTYTDVL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3173 347 PANTHER F-BOX PROTEIN SKIP28 41 340 - -
Vra7g3173 347 SUPERFAMILY RNI-like 105 194 - -
Vra7g3173 347 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 264 275 IPR017900 -
Vra7g3173 347 Gene3D Ribonuclease Inhibitor 90 232 IPR032675 -
Vra7g3173 347 SUPERFAMILY F-box domain 52 99 IPR036047 GO:0005515
Vra7g3173 347 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 41 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3173 Vra-Chr7 51438540 51440405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3173 - - vra:106769044 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3173 7 51438540 51440405 Vra7g3173 7 51438540 51440405 ECH