Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3157 ATGGCGGGTTCTTCGATCATGGAGAACCTCTTCCAACGCTCGCTGGAGGATATGATCAAATCCATGCGCCTCCAACTCATCGGCGAAACTACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGGGAGATCAAATCTACCGACCAGCAAACCAAATCCACTGCGCTCCAGAAGCTCTCTTACCTCTCTGCCGTGCACGGCGTCGACATGTCCTGGGCGTCCTTCCACGTCGTCGAGGTCATGTCCTCCTCCAAGTTCGCCCACAAGAGGATCGGTTACCACGCCGCTTCTCAATCCTTTAACGACGACACGCCGGTGCTCCTACTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGAATTCGAGGTAAGCCTCGCTCTCAATTTGTTGTCCCGAATTGCCACTCTCGACCTCGCTCGCGATTTGACGCCCGAGGTTTTCAAATTGCTCTCCACCACTAAGGTTTTCGTCAGGAAGAAGGCCATCGCCGTCGTTTTGAGGGTTTTCGATAAGTACCCCGACGCCGTTAGGGTTTGCTTCAAGCGCTTGGTTGAGAATCTCGAGAGTTCCGATCCTCTGGTTGTGACCGCCGTGATTGGAGTTTTCTGCGAGCTGGCTGCCAAGGATCCTAGGTCATATCTTCCCTTGGCGCCGGAGTTTTATAGGATTTTGGTTGATTCTAAGAACAATTGGGTTTTGATCAAGGTGCTCAAGGTGTTTGCTAAGTTGGCTCCCTTGGAGCATAGATTAGGGAAAAGGATTGTTGAGCCGGTTTGTGATCACATGAGGAGGTCTGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGATTATGAGTCAGCTGTTAAGCTCGCGGTTGAGAAGGTTAGGGAGTTGGTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGGCTACAAGCACTTTCGGTTGCTGTACCCAAGCACTTGTGGGCGGTCTTGGAGAATAAGGAAGCGGTGGTAAAGTCGTTGAGTGATGATGATTTGAATATCAAGATTGAGTCTCTGCGATTGTTGATGGCCATGGTATCTGAGAGCCATGTTGCAGATATCTCCAGGGTGTTGCTTAATTATGCGTTGAAATCTGACCCTGGATTTTGCAACGAGATATTGGATTCCATTTTGAGGACATGTTCTAGAAATTTGTATGAGATTGTTGTTGACTTTGATTGGTACGTGTCTCTTCTTGGAGAAATGGCCACGATTCCTAATTGCCAAAAGGGGGAAGAGATTGAAACACAGCTTGTTGACATTGGCATGAGAGTTAAGGATGCTAGAATGGAGCTCGTTCGAGTGGGGCGTGATCTTTTGATTGACCCGGCATTACTGGGTAATGTGCACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTATGTTGAGTTTGCAAGCAATCCCGTTGAACTCATGGATGCACTCCTACAGCCTCGTACCAGTCTCTTGCCATCATCCATTAGAGCAGTTTATATTAATTCTGTTCTTAAAATTTTAATTTTTTGTCTCGACTGCTACCTTTTGCAAAATGATGGTTCTGGATCTTTATATTCTGGTAATTTGGAAGGGGGACAATCAGAGTTGTTTAGTGCAAAAAATGACACTGAGGCTACGAAATTGGCAACTTGTGGAGGTTCAAATTATGAACAGGATGTTGGTTTTAACCCAAGGAATACAGCTGACTCTTCTGAAGATCTCTCTGTTGAAAATGGTATAGATAGAGTTGCTACTCATGGTAAAACATTTACATCTACTGGAGTGGGAAGGAAGAATTTCATGCACGAATCTATTGTAAGCTTATTGAATAGAATTGAATTAATTTTTGGCCCGCTAATAACAAACCAGGATGTTGAAGTGCTGGAGAGAGCACAAAACATACTTTCCCTTGTTCAGTTGATTAAAGAAGAAATAATTGATAATTCAGTCCAGAGTGCGGACACCGTAGAAAAGAAAGACACTCGAGTTTCAACTATTATCAATTTGATGCGTGATGCTTTTACTACGGAACTTGGTCCAATCTCAGTAAGTGCACAGGGCAGAGTTGCTGTGCCGGAAGGACTAGTTCTTAAAGAAAATCTTGATGAATTACAAGCAATATGTGGTGATACCGAACTATCTTTATCGAGTTCGTTTGCCACAGGGGGCCCTCACGGTACCCCTATTTCCGATGCTTCTTCATCTAATCTTCTGCAAAATGAAGAGTTAGGGCCTTTGAATGAATCCACATCCTTGATTGAACATCGTAAGAGACATGGGTTATATTATCTTCCTTCGGAGAAGAGTGAGATTGTTCCAGACGAGTATCCTCGTGCAAATGATCCGAAGTCAAACAGTAATATAAATGGTGAAGCTGCCGAACTAGTCAAGCTGACAGAGCAATCACTTCTTATGAAGAAAAGGACAAACCAAACAAAGCCCAGGCCGGTAGTAGTGAAATTGGATGATGGAGATCTGGCACCTATTTCAGTCAAAAGGCCAGAGCCTAGGGACGATTCTCTTTCTGGTGCCATACAAGATGTTCTTCTAGGAAGTGAAAGTGGACCAAGTGTGTCTCGAAGTTACCCTTCTAATAAGTCATCAAGGAAGCAGAAAGAGAAAAAGAAACTAAGCACGAATGGTCGATCTGAAATGAAGGAAAATGCAGTTGATTCAGAAAAGCCTGACCCTGAAAGTGCAAATTCTAGTAGCAAAAATCATGGTCATAGTAAAGAGAGAAAACACAGAGGAAAAGAAAAGATTGTTGAGGGTGAAGAGCATGATCAGGAGGGAAAGAAAAAGAGTGGCCACCGCCATGGTAGGAGAAAAACTCATCACAGAGCGAAGTCACCCTTAAGTGTGGCTTCCCAAACTCCAGTCATTCCTGATTTTCTTTTGTAG 2928 0.4498 MAGSSIMENLFQRSLEDMIKSMRLQLIGETTFISKATEEIRREIKSTDQQTKSTALQKLSYLSAVHGVDMSWASFHVVEVMSSSKFAHKRIGYHAASQSFNDDTPVLLLITNQLRKDLSSTNEFEVSLALNLLSRIATLDLARDLTPEVFKLLSTTKVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPLVVTAVIGVFCELAAKDPRSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEHRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTSLSDYESAVKLAVEKVRELVVDQDPNLRYLGLQALSVAVPKHLWAVLENKEAVVKSLSDDDLNIKIESLRLLMAMVSESHVADISRVLLNYALKSDPGFCNEILDSILRTCSRNLYEIVVDFDWYVSLLGEMATIPNCQKGEEIETQLVDIGMRVKDARMELVRVGRDLLIDPALLGNVHLHRILCAAAWVAGEYVEFASNPVELMDALLQPRTSLLPSSIRAVYINSVLKILIFCLDCYLLQNDGSGSLYSGNLEGGQSELFSAKNDTEATKLATCGGSNYEQDVGFNPRNTADSSEDLSVENGIDRVATHGKTFTSTGVGRKNFMHESIVSLLNRIELIFGPLITNQDVEVLERAQNILSLVQLIKEEIIDNSVQSADTVEKKDTRVSTIINLMRDAFTTELGPISVSAQGRVAVPEGLVLKENLDELQAICGDTELSLSSSFATGGPHGTPISDASSSNLLQNEELGPLNESTSLIEHRKRHGLYYLPSEKSEIVPDEYPRANDPKSNSNINGEAAELVKLTEQSLLMKKRTNQTKPRPVVVKLDDGDLAPISVKRPEPRDDSLSGAIQDVLLGSESGPSVSRSYPSNKSSRKQKEKKKLSTNGRSEMKENAVDSEKPDPESANSSSKNHGHSKERKHRGKEKIVEGEEHDQEGKKKSGHRHGRRKTHHRAKSPLSVASQTPVIPDFLL* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3157 975 PIRSF AP3_delta 1 969 IPR017105 GO:0015031|GO:0030123
Vra7g3157 975 MobiDBLite consensus disorder prediction 943 958 - -
Vra7g3157 975 SUPERFAMILY ARM repeat 30 657 IPR016024 -
Vra7g3157 975 Pfam Adaptin N terminal region 31 494 IPR002553 GO:0006886|GO:0016192|GO:0030117
Vra7g3157 975 MobiDBLite consensus disorder prediction 925 942 - -
Vra7g3157 975 MobiDBLite consensus disorder prediction 858 975 - -
Vra7g3157 975 Gene3D - 4 545 IPR011989 -
Vra7g3157 975 PANTHER DELTA ADAPTIN-RELATED 3 974 IPR017105 GO:0015031|GO:0030123
Vra7g3157 975 MobiDBLite consensus disorder prediction 886 909 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3157 K12396 - gmx:100815221 1586.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3157 7 51311055 51314366 Vra7g3157 7 51311055 51314366 ECH