Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3131 ATGAACATTTGTAGTTTTTGGGTATCGTCCATGAAAATCCCCTTTCACGGGTGTCGATTCTCAAGGCCTTTCTTCTCTCTATCTTCTTCGTCTCGCAATCGCATCATGACCATTCAAAGTTCTTCTTCTACTGCTTCCATATCAACCGAGTCCAAAGAGAAGAAGAAGGAAAATTTACCTTGGTTAATCGTTGGCCTCGGTAATCCAGGCAAAAAGTACGCTGCCACTCGCCACAATGTGGGCTTTGAGATGGTTGATGCCATAGCTGAAGCTGAAGGGATATCTATGAACACCGTTTCCTTCAAAGCTTTATTTGGGAAAGGTTTAATAGGTGATGTCCCAGTCATACTTGCAAAACCACAGACTTTTATGAATTCTAGCGGTGAATCTGTTGGGGCCATAGTCTCGTACTACAAGATTCCACTAAAGCAAGTACTTGTGATCTTTGATGACTTGGATTTACCTTTTGCTAAATTGCGGCTTCTACCAAAGGGTGGACATGGAGGCCACAATGGAATGAAGAGTGTTATTAATCATTTCAAAGGGAATACTGGTTTTCCTCGTTTAAGAATTGGCATCGGACGACCTCCCGGTAAAATGGATCCTGTAGCATTTGTTCTTCGCACGTTCACTAAACAGGAAAGAGAAGAGTTGAGTTTTACATTACAAGATGGAATAGAAGCTCTTCGGATTCTTTTGCTGGAAGGATTTGATAAAAGTGCAACATTTGTTAATAGTGCCAAAAAGATGGAGCAAACAGGTTGA 765 0.4144 MNICSFWVSSMKIPFHGCRFSRPFFSLSSSSRNRIMTIQSSSSTASISTESKEKKKENLPWLIVGLGNPGKKYAATRHNVGFEMVDAIAEAEGISMNTVSFKALFGKGLIGDVPVILAKPQTFMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLRTFTKQEREELSFTLQDGIEALRILLLEGFDKSATFVNSAKKMEQTG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3131 254 Gene3D - 45 248 IPR036416 GO:0004045
Vra7g3131 254 Hamap Peptidyl-tRNA hydrolase [pth]. 60 238 IPR001328 GO:0004045
Vra7g3131 254 ProSitePatterns Peptidyl-tRNA hydrolase signature 1. 73 86 IPR018171 GO:0004045
Vra7g3131 254 Pfam Peptidyl-tRNA hydrolase 62 240 IPR001328 GO:0004045
Vra7g3131 254 PANTHER PEPTIDYL-TRNA HYDROLASE CHLOROPLASTIC 25 248 - -
Vra7g3131 254 ProSitePatterns Peptidyl-tRNA hydrolase signature 2. 166 176 IPR018171 GO:0004045
Vra7g3131 254 TIGRFAM pth: aminoacyl-tRNA hydrolase 62 241 IPR001328 GO:0004045
Vra7g3131 254 PANTHER PEPTIDYL-TRNA HYDROLASE 25 248 IPR001328 GO:0004045
Vra7g3131 254 SUPERFAMILY Peptidyl-tRNA hydrolase-like 60 245 IPR036416 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3131 Vra-Chr7 51107438 51111100 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3131 K01056 - gmx:100526866 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3131 7 51107438 51111100 Vra7g3131 7 51107438 51111100 ECH