Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g3129 ATGGATAACGAATTGTGGCGCTATTGTAAACTTGGCGTTTGGTCGTTCATTCAATTTCAAAGCGAGAGAAGAGAGAGAGTAATGGCCTCTTGTGCATCTTCGTCTTGGCTTGTGCTCTCATCCACCAACGCCAAACACAAACCCAGCTGCTTCAAATTCAATGCTCCCATCGCTTCACAAATCCAATGGCATTCAGACTCGGATACCCAAAGAAACCTCCGTCACCCTCCCGAAATTAAACGCCACTGGGTGGAAGCATCTGATGAATCTTTGCATTCTCTGGAAAGATTCACAGTGGCCTCTTACAACATACTGGGGGATAGAAATGCTTCTCAACACTCGGATTTATACGTAAACGTTCCTTCTCGTTACATCAAATGGGATCGTCGCAAGAGGGTTATTTCTGATGAGCTTCTTGGGTGGGACCCTGATATCATCTGCTTACAAGAGGTGGATAAGTATTTGGAACTTTCAGACATTATGGTTAAAGCAGGATATGCTGGATCTTATCAGAGACGCACGGGAGATTCAGTTGACGGATGTGCCATGTTTTGGAAAACTGATAAGTTCCGGTTACTAGAAGGAGAGAACATTAAATTTAAGGACATTGGCCTTCGTGATAATGTTGCCCAACTATCAGTTTTTGAGATGTGTGAATCTTACTCAAGAAGACTGTTAGTTGGTAACATCCATCTACTTTACAACCCAAACAAGGGAGAAGTTAAATTAGGTCAAATTCGTTTTCTCTCGTCAAGAGCACATTATCTCTCTGAGAAATGGGGTAATACCCCTGTTGTGCTAGCTGGTGATTTTAATAGTACTCCTCAGAGTGGAATATATAAGTTTTTGTCATCATCTGAGCTTAATGTCAAGCTGTATGACAAAAAGGAATTATCTGGACAGAAACGGTGTCGTCCTGCTCAAGTTATAGGGGAGAATAAAGCAACAGCTGGTCCAGTTGTCACCCTAGACGGCTCGTTAAAATGTTGGACAGATGAAGAGATAAAAATAGCTACCGGAGATTCTCAGCATCATTTGGCTGTGCATCCATTGAAGCTGAAAAGTTCGTATGCCACAGTTAATGGTTCAAAAAGTACACGGGGATTCAATGGTGAACCCTTGGCAACTTCCTATCACTCAAAGTTTCTTGGCTCTGTAGATTACTTATGGTACTCGGACGGTATTGTACCTACAAGAGTTCTTGATACCGTTTCAATAAGTGATCTCGTGAGGGCAGGTGGCCTCCCATGCAAGGTGGGAAGTGATCATTTGGCCTTGGTTTCTGAATTTACTTTCTCAGTTACAAACAATGAACCTACAGACATAGTGGCAGTAGTAGCAGCAGCACCAGCCATGGTAGATATTGAAGAGCCTAACAATCAGCAGTCATAA 1392 0.4267 MDNELWRYCKLGVWSFIQFQSERRERVMASCASSSWLVLSSTNAKHKPSCFKFNAPIASQIQWHSDSDTQRNLRHPPEIKRHWVEASDESLHSLERFTVASYNILGDRNASQHSDLYVNVPSRYIKWDRRKRVISDELLGWDPDIICLQEVDKYLELSDIMVKAGYAGSYQRRTGDSVDGCAMFWKTDKFRLLEGENIKFKDIGLRDNVAQLSVFEMCESYSRRLLVGNIHLLYNPNKGEVKLGQIRFLSSRAHYLSEKWGNTPVVLAGDFNSTPQSGIYKFLSSSELNVKLYDKKELSGQKRCRPAQVIGENKATAGPVVTLDGSLKCWTDEEIKIATGDSQHHLAVHPLKLKSSYATVNGSKSTRGFNGEPLATSYHSKFLGSVDYLWYSDGIVPTRVLDTVSISDLVRAGGLPCKVGSDHLALVSEFTFSVTNNEPTDIVAVVAAAPAMVDIEEPNNQQS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g3129 463 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 3 47 434 - -
Vra7g3129 463 Pfam Endonuclease/Exonuclease/phosphatase family 100 423 IPR005135 GO:0003824
Vra7g3129 463 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 47 434 - -
Vra7g3129 463 Gene3D Endonuclease/exonuclease/phosphatase 69 448 IPR036691 -
Vra7g3129 463 SUPERFAMILY DNase I-like 95 436 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g3129 Vra-Chr7 51090162 51096504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g3129 78 285 EF-hand Containing Proteins AT5G54130 28.251 1.03e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g3129 - - gmx:100779393 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3129 7 51090162 51096504 Vra7g3129 7 51090162 51096504 ECH