Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2778 ATGGCCGACAAACACAACCTCAAGAATCCAGCCGTCAAACGGATTCTCCAAGAGTTGAAAGAGATGCAATCAAACCCTTCCGATGACTACATCAGTCTCCCTCTCGAGGAAAATATATTTGAATGGCAATTTGCGATTAGGGGACCTCGTGACACTGAATTTGAGGGTGGTATTTATCATGGACGAATTCAGTTGCCTTCAGAATATCCCTTCAAACCTCCTTCATTCATGCTGCTGACGCCTAGTGGCCGTTTTGAGACCCAAACCAAGATTTGCTTGAGCATTTCAAATCATCACCCTGAGCATTGGCAACCATCATGGAGTGTGAGGACTGCTCTAGTTGCGCTGATTGCATTCATGCCCTCCAACCCAAATGGCGCGCTGGGCTCGTTAAGCTACAAGAAAGAAGACAGGCGTGCCCTAGCCATTAAATCCCGTGAAGCACCTCCAAAATTTGGGACTCCTGAACGTCAAAAACTTATTGATGAGATACACGAGTATATGCTAAGCAAATCATCCCCTGTTCCAGAAGGTGGTCTCTCACAAGTTTCTGAGGGACAATCCATAACAGAGGAGGCTGAGACCCTGGTGAATTTGCAAAATCCTGAGCCTTTACCTGCAGGAGAGGGGATTCCAGATATAGCAGGTGACAGAATAATTGAAGAACAAGAGCATCCTGCCAATGCTAATCCTGACCTTGCAGGAGCTGAAGTTTCAATGGAGAACACATCTAGTGTCCCAAGAAGCCAGTTGATCCAAAAGTCAGATGCAATGGTTCAAAATATGAAACCAGAGACAAGGGCTCCAAAACCAGACGACCGATTGTTCACGCTGGCAGCTATTGGACTTACTATAGCAATTGTGGTTCTTTTACTGAAGAAGTTCGTTAAATCTACAGGACATGGTGCTGTTTTCATGGATGAATCTTAG 930 0.4538 MADKHNLKNPAVKRILQELKEMQSNPSDDYISLPLEENIFEWQFAIRGPRDTEFEGGIYHGRIQLPSEYPFKPPSFMLLTPSGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPSNPNGALGSLSYKKEDRRALAIKSREAPPKFGTPERQKLIDEIHEYMLSKSSPVPEGGLSQVSEGQSITEEAETLVNLQNPEPLPAGEGIPDIAGDRIIEEQEHPANANPDLAGAEVSMENTSSVPRSQLIQKSDAMVQNMKPETRAPKPDDRLFTLAAIGLTIAIVVLLLKKFVKSTGHGAVFMDES* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2778 309 CDD UBCc 12 151 IPR000608 -
Vra7g2778 309 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 309 - -
Vra7g2778 309 SMART ubc_7 13 173 - -
Vra7g2778 309 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 10 165 IPR000608 -
Vra7g2778 309 Pfam Ubiquitin-conjugating enzyme 14 125 IPR000608 -
Vra7g2778 309 Gene3D Ubiquitin Conjugating Enzyme 1 174 IPR016135 -
Vra7g2778 309 PANTHER BNAC01G21910D PROTEIN 6 309 - -
Vra7g2778 309 SUPERFAMILY UBC-like 11 127 IPR016135 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2778 1 308 Miscellaneous Gene Families AT3G17000 61.981 1.14e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2778 K10578 - gmx:100804054 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2778 7 48020941 48023089 Vra7g2778 7 48020941 48023089 ECH