Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2773 ATGAACGCCGTCCCTTCTTCTTCCTCTTCCGCCTTCGCTTTCGTAACTCAGTCCAAGAACCCTAACTATATCTTCAAGCTCACACATAAAGTACCCATTTTGCCCTTACACTCACATGCTCCGTGTTGCTCTCTCAGTGACTCATCCTCCTCGTACACCACGGTGCTGGACAAAAGTGCCCTTTCATCGGAACAGAATTACAGCAATGCAGTTTCGCCCGAAGACTCGGGCTCCGTGGATGCCCTTGCGGTTCGCCGGCCGGTGACGGATTTTTCCGGCGAAGAGGAAGAAGAGAAGGAGGCGGAGGAGGAGGAAGAGAAGGAGAATGAAGCGGATGACGGTGGTGACACGAAGGCATCGGCGATCGACGCGGGGCTCGCGAAATTCGCGAAGAAGATGCCCATGTTTGAACCTGAGAGGGTGGAATCGAAAGAGAGACCCCTCAAAGTGAATTTGGACTTGGCGTTATACAGGGCGAAGCTTATGGCTAGAAGAAGCTTTCGATATGAAGAAGCAGAGGCATTGCTTCGAAAGTGTATAAGCTTTTGGCCTGAAGATGGTCGACCTTACGTGGTACTTGGAAAGATTTTGAGCAAGCAATCGAAAACAGGTGAAGCCAGAGAGATATACGAGAAGGGTTGCCAGGCTACGCAGGGTGAAAATGCTTACATCTGGCAGTGCTGGGCTGTTCTTGAAATGCAAATGGGAAATTTCAGGAGAGCAAGAGAGTTGTTTGATGCTGCCACGGTTGCTGATAAGAAGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAGTTAAAGCAGGGAAATATAAAGAAGGCAAGGAGTCTACTCGGTAAAGGTCTTCAATATGGTGGACAGAATGAGTACATATACCAAACACTTGCACTGCTTGAAGCTAGAGCAAAAAGATATCAGCAGGCTCGTTATTTATTCAATCAGGCCACAAAGTGTAATCCTAATAGCTGTGCTAGTTGGCTTAGTTGGGCTCAAATGGAGGTGGAACAAGCAAACTACCGTGCTGCTAGGAAATTGTTTGAGAAAGCAGTGCAGGCTAGTCCCAAAAATAGGTTTGCTTGGCATGTATGGGGCGTTTTTGAAGCAAACATTGGCAACATTGACAAGGGAAGAAAACTTTTAACGATAGGCCACAATCTAAATCCAAGGGATGCTGTTCTACTTCAATCTCTTGCTTTATTAGAATACCAACACACAACTGCAAACCTTGCTCGGGTTTTGTTCAGGAGAGCGTCAGAATTGAATCCAAGGCACCAACCTGTTTGGTTTGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACATGAATAAAGCCAGAGAATTCTACCAAAAAACACTCTCAATTGATCAGAACAGTGAAACTGCTGGCAGATGCCTTCAGGCTTGGGGTGTTCTGGAGCAGAGGCTTGGCAATCTTTCAACTGCACGTAGATTATTTAAATCCTCGCTGAATGTAAATTCTCAGAGTTATGTGACATGGATGACTTGGGCAACAATGGAGGAAGAACAAGGAAACTCCGTGCGTGCTGAAGAGATTCGTAATCTCTATTTCCAACAGCGCACAGAAGTTGTAGATGATGCTTCATGGGTTATGGGATTCTTAGATATTTTAGATCCGGCCATTGACACTTTAAAGACGCTCCTCAAGCTGAGCCCAAATTCCTACAACATGCCATTTAATTCTTTGAGAAATATTTCGGGAACAGATAAAAACAGTGACGATTTTTCTATTGAAGACGATGATGAGGATGATGCAAATGGTGAAAGTGACTTCGATTTGGATGCTTTCATTATGAAAAGACTATCCTTAGATTCCTCCAATCTGGAAGTTCAGTTGGAAGCACCCAAAACTTCTTCTGAGAAGAGAATTCCATCTGGTAGAAGGATATGGCGACCAAATAACACAATTGCTAAAGTCCAAGTCCAAAGAAATGTTGTTTAG 1962 0.4501 MNAVPSSSSSAFAFVTQSKNPNYIFKLTHKVPILPLHSHAPCCSLSDSSSSYTTVLDKSALSSEQNYSNAVSPEDSGSVDALAVRRPVTDFSGEEEEEKEAEEEEEKENEADDGGDTKASAIDAGLAKFAKKMPMFEPERVESKERPLKVNLDLALYRAKLMARRSFRYEEAEALLRKCISFWPEDGRPYVVLGKILSKQSKTGEAREIYEKGCQATQGENAYIWQCWAVLEMQMGNFRRARELFDAATVADKKHVAAWHGWAVLELKQGNIKKARSLLGKGLQYGGQNEYIYQTLALLEARAKRYQQARYLFNQATKCNPNSCASWLSWAQMEVEQANYRAARKLFEKAVQASPKNRFAWHVWGVFEANIGNIDKGRKLLTIGHNLNPRDAVLLQSLALLEYQHTTANLARVLFRRASELNPRHQPVWFAWGWMEWKEGNMNKAREFYQKTLSIDQNSETAGRCLQAWGVLEQRLGNLSTARRLFKSSLNVNSQSYVTWMTWATMEEEQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLDILDPAIDTLKTLLKLSPNSYNMPFNSLRNISGTDKNSDDFSIEDDDEDDANGESDFDLDAFIMKRLSLDSSNLEVQLEAPKTSSEKRIPSGRRIWRPNNTIAKVQVQRNVV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2773 653 MobiDBLite consensus disorder prediction 581 596 - -
Vra7g2773 653 MobiDBLite consensus disorder prediction 94 111 - -
Vra7g2773 653 Pfam Tetratricopeptide repeat 231 279 - -
Vra7g2773 653 Pfam Tetratricopeptide repeat 296 357 - -
Vra7g2773 653 SUPERFAMILY TPR-like 91 403 IPR011990 GO:0005515
Vra7g2773 653 ProSiteProfiles TPR repeat profile. 426 459 IPR019734 GO:0005515
Vra7g2773 653 ProSiteProfiles TPR repeat profile. 324 357 IPR019734 GO:0005515
Vra7g2773 653 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 22 642 IPR044624 GO:0003729|GO:0006397
Vra7g2773 653 MobiDBLite consensus disorder prediction 66 118 - -
Vra7g2773 653 Gene3D Tetratricopeptide repeat domain 220 563 IPR011990 GO:0005515
Vra7g2773 653 MobiDBLite consensus disorder prediction 577 596 - -
Vra7g2773 653 SMART hat_new_1 440 475 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 270 302 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 304 336 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 338 370 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 406 438 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 372 404 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 236 268 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 201 234 IPR003107 GO:0006396
Vra7g2773 653 SMART hat_new_1 477 509 IPR003107 GO:0006396
Vra7g2773 653 ProSiteProfiles TPR repeat profile. 290 323 IPR019734 GO:0005515
Vra7g2773 653 SUPERFAMILY TPR-like 360 561 IPR011990 GO:0005515
Vra7g2773 653 Coils Coil 91 114 - -
Vra7g2773 653 Gene3D Tetratricopeptide repeat domain 149 219 IPR011990 GO:0005515
Vra7g2773 653 Pfam Tetratricopeptide repeat 428 458 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 392 425 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 153 186 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 187 220 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 222 255 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 463 496 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 426 459 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 290 323 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 256 289 IPR019734 GO:0005515
Vra7g2773 653 SMART tpr_5 324 357 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2773 - - gmx:100819232 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2773 7 47980164 47984178 Vra7g2773 7 47980164 47984178 ECH