Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2765 ATGGAAAATACGACGGAGTTCGAGCACTTCGACGTGGTGTCAGACGATTCCGATCACCATTTTCTGGGTTCAAAGAAGGGAAAATGGTTCAGCGATTCAAAGAGCACAGTGTACAAAACCATCGTGAAAGAGTGGAAGATTCTCCAGCAGAACTTACCGGAATCAATCTATGTCAGAGTCTACGAGCAACGCATTGATCTAATGAGGGCTGTGATCGTAGGCGCTGCGGGCACACCGTATCACGATGGTCTCTTCTTCTTCGACATCGTGTTTCCTTCAGATTATCCGAGGAACCCTCCGAAGCTGTATTACCATTCCTTCGGGTACAGACAGAACCCGAACCTGTACACGAACGGGAAAGTGTGTTTGAGTCTGTTGAACACGTGGTACGGGAGAAAGAAGGAGAAGTGGGACCCTAGTGAGTCCACCATGTTGCAAGTGTTGCTCTCGATTCAAGCTCTGGTTCTGAACGAGAAACCATTTTTCAACGAACCTGAGGCTGTGCCATCGGAGAAGAAGTCACGTGCGTACAACGAGAACGTCTTCCTTACTACTTGCGTCACCTCCTTCCACCTGCTTAAGCGGCCGCCGCGGAATTTCGAAGCCTTCGTCAGAGATCATTTTCGCCGGCGGGCGTTTTCGATTCTGGCGGCTTGCGGCGAATACGCGAGTGGACGCGTGGGAGTTGGGTATTATAATTACCATGACTTTCGTTTTCCGATGGTCCAAGTTTCGAAGAGTTTCAAGGAGCGGATGGTGGTGCTTTACCCTCGGCTCTTCGAAGCGTTTCGTCAGAATGGTGCTCCTTTGGAGGGTTTGGCAGAACGATTGGAGGTGCAGAGCCAAGAATCTGAAACCAAAAGAAGTGGAGTCTTCAAAAAGATAGTGGAAAAGATCAAAAAGGCTTTCAGATTCAAGAAATTTGGTAAGAACAAAATTAGCCAGGTGGAGGGGAGAAATCGTGGTCTTGAAAGTGTCTGA 981 0.4862 MENTTEFEHFDVVSDDSDHHFLGSKKGKWFSDSKSTVYKTIVKEWKILQQNLPESIYVRVYEQRIDLMRAVIVGAAGTPYHDGLFFFDIVFPSDYPRNPPKLYYHSFGYRQNPNLYTNGKVCLSLLNTWYGRKKEKWDPSESTMLQVLLSIQALVLNEKPFFNEPEAVPSEKKSRAYNENVFLTTCVTSFHLLKRPPRNFEAFVRDHFRRRAFSILAACGEYASGRVGVGYYNYHDFRFPMVQVSKSFKERMVVLYPRLFEAFRQNGAPLEGLAERLEVQSQESETKRSGVFKKIVEKIKKAFRFKKFGKNKISQVEGRNRGLESV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2765 326 Gene3D Ubiquitin Conjugating Enzyme 1 257 IPR016135 -
Vra7g2765 326 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 2 291 - -
Vra7g2765 326 SUPERFAMILY UBC-like 32 197 IPR016135 -
Vra7g2765 326 Pfam Ubiquitin-conjugating enzyme 41 181 IPR000608 -
Vra7g2765 326 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 36 213 IPR000608 -
Vra7g2765 326 SMART ubc_7 39 190 - -
Vra7g2765 326 CDD UBCc 38 185 IPR000608 -
Vra7g2765 326 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2765 Vra-Chr7 47925943 47927234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2765 3 267 Miscellaneous Gene Families AT2G33770 50.923 2.86e-81 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2765 K10581 - gmx:100791343 455.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2765 7 47925943 47927234 Vra7g2765 7 47925943 47927234 ECH