Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2755 ATGGCTATTCGGCAAGATACGATCGTGGCGATTCGGAAAAACGACGCGGAAAAGGTTCTCAGGATTGCTAACGTGAACGGTGAAAAATATTCTGTTTGTACTTATCCTGCTGATCCTCTCCAGGAAATCGACTTGAAGAATCACAAATGGGGCCATTATTTTATTTGTGGGTACAAAGGTTTCTATGACTATGCAAAACTGAAAGGAGTGGATGTTGGTGAACCTGTTGGGCTTGATGTTCTTGTTGATGGAACAGTGCCAACAGGTTCTGGGCTATCAAGCTCTGCAGCGTTTGTCTGCTCATCCACAATTGCTATTATGGCTGCTTTTGATGTGAACTTCCCAAAGAAAGAACTTGCGCAAGTTACATGTGCTTGTGAACGACATATTGGTACACAATCTGGTGGAATGGACCAGGCAATCTCTGTCATGGCCAAGACTGGCTTTGCAGAGCTGATTGATTTCAACCCAATTCGTACAACAGATGTGCAACTTCCTGCTGGTGGAACTTTTGTGATAGCTCATTCTCTGGCAGAGTCTCAGAAGGCTGTTACTGCTGCGACAAATTACAACAATAGGGTTCTTGAGTGCCGTTTGTCTTCTATTGTTCTAGCTATAAAGCTAGGAATGGATCCAAAAGAGGCAATATCAAAAGTGAGCACACTGTCTGATGTTGAAGGTTTATGTGTGACATTTGCTGGTATTCATAACTCATCTGATCCTGTACTTGCTGTAAAGGAATATTTGAAAGAAGAACCATATACAGCCGAAGAAATTGAAGAAGCTGTTGGGGAAAAGCTTACCTCATTTTTGGGCAACAATGCAGCTTATTTAGAAGTCTTAAAAGCTGCAAAGCAATACAAGTTGCATCAGAGAGCTGCTCACGTGTATTCAGAAGCAAAGAGGGTACATGCTTTCAAGGATGTCGTATCCTCAGATCTAAGCGACGAGGACAAGCTAAAGAGGCTTGGTGACCTTATGAACGAGAGTCATCATAGCTGCAGCGTTTTATATGAGTGCAGCTGTCCAGAATTGGAAGAACTTGTAAATGTTTGTCGTAACAATGGTGCTCTCGGGGCTAGGCTTACTGGAGCTGGATGGGGTGGTTGTGCAGTTGCTTTGGTGAAGGAGAACATAGTTCCACAATTTATCCTTAATTTAAAGGAATGCTTCTATCAGTCTAGGATAGACAAGGGCGTTATTAAGAAGAACGATCTTGGCCTTTATGTATTTGCTTCCAAGCCATCAAGTGGTGCTGCTATATTCAAATTTTAG 1275 0.4251 MAIRQDTIVAIRKNDAEKVLRIANVNGEKYSVCTYPADPLQEIDLKNHKWGHYFICGYKGFYDYAKLKGVDVGEPVGLDVLVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKELAQVTCACERHIGTQSGGMDQAISVMAKTGFAELIDFNPIRTTDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVLECRLSSIVLAIKLGMDPKEAISKVSTLSDVEGLCVTFAGIHNSSDPVLAVKEYLKEEPYTAEEIEEAVGEKLTSFLGNNAAYLEVLKAAKQYKLHQRAAHVYSEAKRVHAFKDVVSSDLSDEDKLKRLGDLMNESHHSCSVLYECSCPELEELVNVCRNNGALGARLTGAGWGGCAVALVKENIVPQFILNLKECFYQSRIDKGVIKKNDLGLYVFASKPSSGAAIFKF* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2755 424 SUPERFAMILY Ribosomal protein S5 domain 2-like 1 167 IPR020568 -
Vra7g2755 424 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 423 - -
Vra7g2755 424 SUPERFAMILY GHMP Kinase, C-terminal domain 170 399 IPR036554 -
Vra7g2755 424 Pfam GHMP kinases C terminal 320 392 IPR013750 -
Vra7g2755 424 PRINTS Mevalonate kinase family signature 84 106 - -
Vra7g2755 424 PRINTS Mevalonate kinase family signature 126 145 - -
Vra7g2755 424 PRINTS Mevalonate kinase family signature 359 376 - -
Vra7g2755 424 Gene3D - 164 393 - -
Vra7g2755 424 PIRSF Galactokinase 1 424 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Vra7g2755 424 Gene3D - 189 339 - -
Vra7g2755 424 Gene3D - 1 163 IPR014721 -
Vra7g2755 424 PANTHER BNAA01G32760D PROTEIN 1 423 - -
Vra7g2755 424 PRINTS Galactokinase signature 77 95 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Vra7g2755 424 PRINTS Galactokinase signature 291 305 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Vra7g2755 424 Pfam GHMP kinases N terminal domain 79 144 IPR006204 GO:0005524
Vra7g2755 424 ProSitePatterns GHMP kinases putative ATP-binding domain. 86 97 IPR006203 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2755 Vra-Chr7 47785570 47790357 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2755 K18674 - gmx:100796793 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2755 7 47785570 47790357 Vra7g2755 7 47785570 47790357 ECH