Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2745 ATGACGCTGGTCGCGCTCTTCCTCACCGCCACCAAGCTCGCCGGTGCTCTCTTTACTCTCACCGTCGCCGCCAACGCTTTCTCCTACTCCCGCTTCCGCAAGAACAACCTTCGCCGATTCCGCTCCCCTGTCGACGAATCCTCCGACACTCTCGCCGACTTTAACTTTGCCGAAGAAGAGTTTTTCTTTGGTCTGGCTACAGCACCGGCTCATGTCGAAGACAGGCTTGATGATGCTTGGATCCAGTTCGCTGAGGAAAAGAGTGGTGACTCCGAGGGGAGGCAGACAGTGGATGCTGTGATGGGTTCTGCTTCTGGCGACGGTGGTTCCCAGCGGGCCGTGACGTCTCCGCGGGGCAGGAAGCCTCTTAAGTTGGCTATGGAAGCCATGATTAGGGGATTTGAGAAGTACTTGGAAGTGGAAGGAAAAGAAGGGGAAGAAGAACCTCGTCCTAATGTAACTGCTTGGCATAATGTTCCACGCCCGGAGGAGAGGTTAAGATTTTGGTCTGATCCTGAAACAGAAATAAATTTGGCCAAGGATACTGGTGTTACCGTTTTTCGCATGGGAATAGATTGGACAAGAATCATGCCAGTGGAGCCAGTAAACAGCCTTAATGAATCTGTTAACTATGCTGCATTGGAACGGTATAAGTGGATTATCAATAAGGTTCGATCATATGGAATGAAGGTGATGCTTACTCTTTTCCATCACTCACTTCCACCCTGGGCTGGTGAATATGGTGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACTTTACGAGGCTTGTTGTAGACAGTGTCTCAGATTTGGTAGACTATTGGGTAACATTTAATGAGCCCCATGTCTTCTGTATGCTTACTTACTGTGCTGGTGCTTGGCCTGGAGGTCATCCTGATATGCTTGAGGTCGCAACTTCAGCACTTCCAACCGGTGTTTTTCAGCAGGCCATGCATTGGATGTCTGTTGCACACTCAAAGGCATATGATTACATCCACGGACAAAGTAACCCATTAAATTCAATAGTTGGTGTAGCACATCATGTGTCATTTATGCGACCCTATGGTTTGTATGACATTGCTGCTGTTTCACTGGCTAATTCATTGACTCTCTTCCCATACATTGATGGAATATCTGAAAAGCTGGACTATATAGGCATAAACTACTATGGACAGGAAGTGGTTTCGGGTGCGGGCCTGAAGCTGGTGGAAAATGATGAGTATAGTGAATCTGGTCGTGGGGTATACCCTGATGGTTTATACCGCATGTTGCTTCAGTTCCATGAAAGATACAGACATCTAAAAATTCCCTTCATCATTACTGAAAATGGGGTTTCGGATGAGACAGATTTGATCCGCCGGCCATATCTCTTGGAGCATTTGCTAGCTGTTTATGCTGCCATAAAAATGGGTGTACGTGTACTTGGTTACCTGTTCTGGACTATTTCTGATAACTGGGAATGGGCCGATGGATATGGTCCCAAGTTCGGACTTGTCGCAGTTGACCGGGCAAATAATCTTGCACGGATCCCTCGCCCCTCTTACCATCTATTTTCTAAAATTGTGAACACGGGCAAAGTTACACGTGAAGATCGTGAAATAGCATGGGATGAACTCCAAAGAGCTGCCAAAGAGAAGAAAACGAGACCATTTTATCGGGCTGTGAATAAACACCGTTTAATGTATGCAGGTGGACTTGATGAGCCAGTACAGCGACCTTATATAGATCGAGATTGGCGGTTTGGTCATTACCAGATGGAAGGACTCCAGGATCACTTGAGCCGCTTCTCAAGATTCATTATTCGACCCTTCTCCCCCAAAAGGAAAACAAAATCTCAAGAGAAGAAGAATCCCAAATTAATTCTTCAGCCTCTTGAAACTTAA 1890 0.4651 MTLVALFLTATKLAGALFTLTVAANAFSYSRFRKNNLRRFRSPVDESSDTLADFNFAEEEFFFGLATAPAHVEDRLDDAWIQFAEEKSGDSEGRQTVDAVMGSASGDGGSQRAVTSPRGRKPLKLAMEAMIRGFEKYLEVEGKEGEEEPRPNVTAWHNVPRPEERLRFWSDPETEINLAKDTGVTVFRMGIDWTRIMPVEPVNSLNESVNYAALERYKWIINKVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFTRLVVDSVSDLVDYWVTFNEPHVFCMLTYCAGAWPGGHPDMLEVATSALPTGVFQQAMHWMSVAHSKAYDYIHGQSNPLNSIVGVAHHVSFMRPYGLYDIAAVSLANSLTLFPYIDGISEKLDYIGINYYGQEVVSGAGLKLVENDEYSESGRGVYPDGLYRMLLQFHERYRHLKIPFIITENGVSDETDLIRRPYLLEHLLAVYAAIKMGVRVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARIPRPSYHLFSKIVNTGKVTREDREIAWDELQRAAKEKKTRPFYRAVNKHRLMYAGGLDEPVQRPYIDRDWRFGHYQMEGLQDHLSRFSRFIIRPFSPKRKTKSQEKKNPKLILQPLET* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2745 629 SUPERFAMILY (Trans)glycosidases 153 532 IPR017853 -
Vra7g2745 629 PANTHER GLYCOSYL HYDROLASE 3 585 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 Pfam Glycosyl hydrolase family 1 380 526 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 Pfam Glycosyl hydrolase family 1 173 358 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 PANTHER GALACTOLIPID GALACTOSYLTRANSFERASE SFR2, CHLOROPLASTIC 3 585 - -
Vra7g2745 629 PRINTS Glycosyl hydrolase family 1 signature 383 397 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 PRINTS Glycosyl hydrolase family 1 signature 440 448 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 PRINTS Glycosyl hydrolase family 1 signature 452 463 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 PRINTS Glycosyl hydrolase family 1 signature 473 490 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 PRINTS Glycosyl hydrolase family 1 signature 497 509 IPR001360 GO:0004553|GO:0005975
Vra7g2745 629 MobiDBLite consensus disorder prediction 609 629 - -
Vra7g2745 629 Gene3D Glycosidases 137 539 - -
Vra7g2745 629 ProSitePatterns Glycosyl hydrolases family 1 active site. 440 448 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2745 Vra-Chr7 47742872 47747458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g2745 6 603 Glycoside Hydrolase AT3G06510 64.006 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2745 K21362 - gmx:100792401 1155.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2745 7 47742872 47747458 Vra7g2745 7 47742872 47747458 ECH