Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2342 ATGGCATCTCAGGAGGCAAGGCCATTGGTGATGGAAGATTTGGATGAAGCCAGCAGCAGTGGATGTGGGTGTGGTTGGTTCAGAGGTTTTGAGTTGAAGAAATGGTGGGGAGAAGGTGATGAAGAGGGTAAAGGGCTACTTGACGAACAAAGTGGGGAGGGAGAGTCATGGTTGGTGGAGAAGCTAAGGAAGGCAAAGGAGGCTTCAGAAGTGATTGCCGGTCCCAAGTGGAAGACTTTGATAAGAAAGATAAGTGGGTATGGGAAGAAGATGAAGCAGCAAAGAAAGAGATTCCAGTATGATGAACACAGCTACAATCTCAACTTCAATAGTGGCGCTCAGAGTGAAGATGAAGCCATGCCTTACAGCTTCTCAGCAAGGTTTGCTGCTCCAGGACGTCGCCAAAACGAATCATGA 417 0.4796 MASQEARPLVMEDLDEASSSGCGCGWFRGFELKKWWGEGDEEGKGLLDEQSGEGESWLVEKLRKAKEASEVIAGPKWKTLIRKISGYGKKMKQQRKRFQYDEHSYNLNFNSGAQSEDEAMPYSFSARFAAPGRRQNES* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2342 138 PANTHER STRESS INDUCED PROTEIN-RELATED 14 134 - -
Vra7g2342 138 PANTHER NHL DOMAIN PROTEIN 14 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2342 Vra-Chr7 43514879 43515945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2342 - - pvu:PHAVU_003G174800g 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2342 7 43514879 43515945 Vra5g0401 5 4170049 4171531 PCT