Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2052 ATGGAAACGGTACCTCGGAAGATGCAATCCAGGGCTAGCCGCCATATTTTTTCAGCATCAGATGACACTACAATGACCAAAAATGTTCGAGCCACCCATGCTCCTGATGATCGACACGTTGAAGTTAGACCTCTTCTGAATGTTGTCCAAGACATATTTCTCCGTGTTGCCTCTCTCATCCCTGACATTGTTAAGTTTGCACAGGGAAAACCAGTGCAAATGGGTGCTATGAAGGACAATATCCAGCAATCAAATCTGGCAGAGGTGCTGGATATTTCGTACCACACAATCAACAGAATTTCCTGCGAGATATGTTGCAAGTGTTCGAGTGGTGATGTACATGCCACGACCATGGGAATACTGAACATGCTCTCAGGCTATTCATGGGATGCGAAGGTGGTAATTGCGTTAGCAGCTTTTGCAGCCAACTTTGGGGAGTTTTGGCTGGTGGCTCAGCTTTATGCCACCAACCGTCTTGCTAAGTCTGTTGCAAAGTTGAAGCACATCCATGAAACACTTGAACAAGTGGATGATTTGGGACTAAAGTTCGAAACAATCAATAACCTTTTAAAGGTAATGTTGGATGTAACCAATTACATTGTTGAATTGCATGAGCTTCCCTCTCGGTACATTGACCCTGAGGCGCCGGAGATGTTGACTGCCTCCACTCTTATCCCCGGTGCTGTCTATTGGACCATTCGGAGTACTGTGTCCTGTGCATCGCATCTTTTAGGCATAACTGGCTTGATTCATGGATATATGACAACAGTGGTAGAGAGTTGGGAGCTTTCCAGTTTGGCGCACAAGCTTGATAACCTAAATGGACACCTTCGCAAGCAACTCACCCTTTGTCAACTGCATTTAGATGACAACAAACAGAGAGAAGCATTTGAAACACTTCGGCTCCTTTTTGAGACACCCCACCAAGATAATTTGAAGGCTCTTAAAGCTATGTTTTGCAGTAACGATAATCCGTTGCCATTGTTTGATGGTTCTTCCAAACAAAGGGTTAGCATTGATGTATTGAGGAGGAAAATTGTTCTACTCTACGTATCAGACCTACATAACGTCCCTGATCAAGAGCTTGTAATATTTGAACAAATGTACCTAGAGTCACGTCAGGATTCAACCAGGTTAGAGAGTCAGTATGAACTAGTTTGGATTCCAGTTGTGGACAAGGCAATCCCATGGACTGAATTAAAGCAGAAGCTTGAAAAGCTGCAATCAACGATGTCATGGTACTCAATTTATGACCCTTCTGTTCTGGAGCCTGCAACCATCAGGTACATTAAAGAAGTATGGCTTTTCAAAGCGAAGCCTATACTTGTTGTGTTGGATCCCCTAGGGAAGGTTGTTAATCTGAATGCATTACCCATGATGTGGATTTGGGGAAGCTTGGCTTACCCTTTCTCTAGCTCAAAGGAGGAAGCATTGTGGAATAATGAAACATGGGGACTTCTACTATTGGCAGACACAATCGATCCATCGCTTCTGTATTGGATATCAGAAGGCAAATATATATGCTTGTACGGAGGGGACGATATGGACTGGATCCGCAAATTCACAAGCACTGCACAATCACTGGCAAAAGCTCTGCAACTACCACTAGAGATGATTTATGTCGGAAAAAGCAATCCCGGGAAGAAAGTTCAAGAAATCAACAATGCCATACAAGAAGAAAAATTGAGCAACGTGCTCCCTGACCTTGCGATAATTTGGTTCTTCTGGGTTAGGCTAGAGAGCATGTGGCACTCCAAATCACAACATAGCAAGACAGTAGAGGAAGACCACATAATGCATGAAGTAATGAGAATCCTAACCTACGATAGTGGTGACCCAGGATGGGCCGTAATTAGTCAAGGCACAGGAACGATGGCACAGGGCAAGGGAGATACGTTTCTAAGGTGCCTGAACGAACATAAGCAGTGGATAGAAACAGCAAAAGATAAAGGAATCTTGCCAGCAATGGCTGATTATATACAAGGACTACAAACCCCTCACCACTGCAACCGCTTGATACTTCCAGGTGGCAGTGGCGGGGTCCCAGACAGAGTGGTCTGCGCGGAATGTGGCAAAACAATGGAGAAGTTCTACATGTATCGCTGCTGTAACGAGTAA 2118 0.4443 METVPRKMQSRASRHIFSASDDTTMTKNVRATHAPDDRHVEVRPLLNVVQDIFLRVASLIPDIVKFAQGKPVQMGAMKDNIQQSNLAEVLDISYHTINRISCEICCKCSSGDVHATTMGILNMLSGYSWDAKVVIALAAFAANFGEFWLVAQLYATNRLAKSVAKLKHIHETLEQVDDLGLKFETINNLLKVMLDVTNYIVELHELPSRYIDPEAPEMLTASTLIPGAVYWTIRSTVSCASHLLGITGLIHGYMTTVVESWELSSLAHKLDNLNGHLRKQLTLCQLHLDDNKQREAFETLRLLFETPHQDNLKALKAMFCSNDNPLPLFDGSSKQRVSIDVLRRKIVLLYVSDLHNVPDQELVIFEQMYLESRQDSTRLESQYELVWIPVVDKAIPWTELKQKLEKLQSTMSWYSIYDPSVLEPATIRYIKEVWLFKAKPILVVLDPLGKVVNLNALPMMWIWGSLAYPFSSSKEEALWNNETWGLLLLADTIDPSLLYWISEGKYICLYGGDDMDWIRKFTSTAQSLAKALQLPLEMIYVGKSNPGKKVQEINNAIQEEKLSNVLPDLAIIWFFWVRLESMWHSKSQHSKTVEEDHIMHEVMRILTYDSGDPGWAVISQGTGTMAQGKGDTFLRCLNEHKQWIETAKDKGILPAMADYIQGLQTPHHCNRLILPGGSGGVPDRVVCAECGKTMEKFYMYRCCNE* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2052 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 1 705 IPR039299 GO:0010088
Vra7g2052 705 PANTHER SIEVE ELEMENT OCCLUSION-RELATED 1 705 - -
Vra7g2052 705 Pfam Sieve element occlusion N-terminus 20 308 IPR027942 -
Vra7g2052 705 Pfam Sieve element occlusion C-terminus 473 704 IPR027944 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2052 Vra-Chr7 40049208 40052645 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2052 - - gmx:100799626 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2052 7 40049208 40052645 Vra7g2052 7 40049208 40052645 ECH