Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g2014 ATGGGTGGTGGAGCTCTTGAAACGAATTGTTTAACAAATGGGGAAACTGAGAGCAGTCTTCACAGACAGTTTTCTCCAGCTCCCGCTGCACTCGACAACTCGCTTTCTGATGCCAATGATGCAGTTGCTGACCATGATGTTCCTGCCAAGAGGGCCAGGCTGCAGAAGGAATTGACCTTTCAGGATATGTATCAAAATGAGGGCGTGTTTGACGAGGACGACGAGGACGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTGCTGCAGAAACTGTACTATGATTAATTTGGATTGCAATGACTGTTGCTATATATGTGGGGAGCACAGGGAGTCTAAAATCCTCAGCCATGGGTTTTTTGCATCTCCTTTAGCTCAAGATGACGATCTGATCGAAGTCCAGGGAGATGTAAAACGACTGAAAGATGTTGGCTCGCAGAAACCAGTGCCAAATAGTTCTACAGCGATTGGCTTTGACGAGAGAATGTTGTTGCATGCAGAAGTAGATAAGAAATCACCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCTAGTCTTTCTAGAGCTGGCATATTTCCTGGAAAATGTTATGCAATTCCTGCTAGGGAAATCACACCAGAAGAACTTATTACGGTTCATTCTTTGGAGCATATTGAGTCTGTGGAAGTTACAACTGAATCACTCTCTAGTTATTTCACTCCAGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTAGCTGCTGGGTTATGTGCTGATCTGGCATCTGCAATTGTTTCCGGACGTGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCATTGGCTGCTCAAGCTGCAGGGGCTAGGAAAGTGCTAATTTTAGATTGGGATGTTCATCATGGAAACGGGACCCAAGAAATCTTTGAACATAACAAATCAGTCTTGTATATATCATTGCATAGACACGAGGATGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGATTGGTAGTATGGGCGCTGAAGGGTACTGTGTGAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTACAATTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTTCTGAGTTTAATCCAGATTTCACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGCGATCCCCTAGGTTGTTGTGACATTACTCCCTCTGGCTATGCACACATGACGCATATGTTGAATACCCTCTCGGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGATCTATATCATCTTCCGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGCTAACCGTTCTGGAAGTCCTCAAAATTCAGATGAAATTTTGGCTTTCCTTGGGTCCGATTTTTGTGAATTTGGAGTCACAATGGAGGATGTACTGTTTCCAAAAAAAAAGGAAACAGATTAAGAAACGACGCCGACTTGTGGTTCCAATGTGGTGGAGGTGGGGACGAAAAAGTTCATTCTTCTATTTTATGAACGGCCACCTTCATAAGAAATCAAAGTCATTATGTTGA 1707 0.4417 MGGGALETNCLTNGETESSLHRQFSPAPAALDNSLSDANDAVADHDVPAKRARLQKELTFQDMYQNEGVFDEDDEDDSDWEPFQLHKCVEFEIKKWCCRNCTMINLDCNDCCYICGEHRESKILSHGFFASPLAQDDDLIEVQGDVKRLKDVGSQKPVPNSSTAIGFDERMLLHAEVDKKSPPHPERPDRLQAIAASLSRAGIFPGKCYAIPAREITPEELITVHSLEHIESVEVTTESLSSYFTPDTYANQHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEHNKSVLYISLHRHEDGKFYPGTGAAEEIGSMGAEGYCVNIPWSRGGVGDNDYNFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNTLSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLLTVLEVLKIQMKFWLSLGPIFVNLESQWRMYCFQKKRKQIKKRRRLVVPMWWRWGRKSSFFYFMNGHLHKKSKSLC* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g2014 568 SUPERFAMILY Arginase/deacetylase 160 488 IPR023696 -
Vra7g2014 568 ProSitePatterns Zinc finger RanBP2-type signature. 96 115 IPR001876 -
Vra7g2014 568 Pfam Histone deacetylase domain 184 472 IPR023801 -
Vra7g2014 568 PANTHER HISTONE DEACETYLASE 38 564 - -
Vra7g2014 568 PANTHER HISTONE DEACETYLASE-RELATED 38 564 - -
Vra7g2014 568 Gene3D Histone deacetylase domain 160 511 IPR037138 -
Vra7g2014 568 PRINTS Histone deacetylase superfamily signature 286 309 IPR000286 -
Vra7g2014 568 PRINTS Histone deacetylase superfamily signature 319 334 IPR000286 -
Vra7g2014 568 PRINTS Histone deacetylase superfamily signature 407 417 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g2014 Vra-Chr7 39652463 39663614 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g2014 - - gmx:100804724 935.636
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g2014 7 39652463 39663614 Vra7g2014 7 39652463 39663614 ECH