Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1997 ATGCTACAAAGAGTAGTGCGATACTCCGCCCAACCATTCAATCCTCCAACTCGCACGACACTACCATCACTTTCGCCAATTCAATTAATACCCATTTCTCCATCTTTCCCAATCCTCAAACAGCAATGCAGATTATCACGTAGAGAGCTCACAATCTTCAGCAACTCTTGCTTGCTACTTCTCTTGGGTACTCAGGCAGTGGATGGATCCAGCGCAAGAGCAGAAGCAGCACTTGCAAACACAAACAACAGTGATCAACCGGAAGGGAATGTGGTTTTTGTAGAAGAGGATGCTGCTAACACAAGCAGCACTGCTCAACCAGAAGAGAATCGTGTTTTAGCAGAAGATGCTGCTAACCAGCAGGCAGAAAATTTGAATTTAGCAGAAGAAAATGTTACTCAAACAAGCAACAGTGACCAACCAGAAGACAATCTAACTACCACTCCTAGCTGCACCGAAAGAAAAACTACCAAACAAGTATTTTTAGACATATCTATTGATGGCGAACCTGCTGGTCGCATTACCATAGGACTTTATGGAGATGAGGTCCCTGCAGGAGTTGACAGGTTTAGTAAGATTGTGAGTGGAGCCGCTGGTATTAGCTACAGAAGAAAAGAGTTTGTCAAAATCATGCCCAATTATGTTCAACATAGTGGCCTTAGATCCTATGGGGTGGATGCTGAAATTTCTTCGAAGACAGGTAGCAACTTGGGAGCTAATAGTCTGGTTCAGGAATGGGAGAGGGAGTATGATAAATGTCCCGGGACTAAAAACGTGACTGGAAGTGTTGGCATTATTGTGAGAAACCCATCAAAACCACCCCCAAAGATGAAGCTGGTTGCAAAGAAAGGGAAGCTTGAGATTGATCAAGAAGAAGTAGGTATTGATCCCAATGGTACAGAATTTGTCATAGTTACAAAGGACTCGCCGGAATTGGATACATCGTCTCTGGTAATTGGAAGAGTGATAGGAGGCATGGAGGTTGCGCAGAGGATCGGTCAGGTTAAAACAGTACAGGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTGATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGTGGTTTGATGCAGTAA 1146 0.438 MLQRVVRYSAQPFNPPTRTTLPSLSPIQLIPISPSFPILKQQCRLSRRELTIFSNSCLLLLLGTQAVDGSSARAEAALANTNNSDQPEGNVVFVEEDAANTSSTAQPEENRVLAEDAANQQAENLNLAEENVTQTSNSDQPEDNLTTTPSCTERKTTKQVFLDISIDGEPAGRITIGLYGDEVPAGVDRFSKIVSGAAGISYRRKEFVKIMPNYVQHSGLRSYGVDAEISSKTGSNLGANSLVQEWEREYDKCPGTKNVTGSVGIIVRNPSKPPPKMKLVAKKGKLEIDQEEVGIDPNGTEFVIVTKDSPELDTSSLVIGRVIGGMEVAQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLMQ* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1997 381 MobiDBLite consensus disorder prediction 130 152 - -
Vra7g1997 381 SUPERFAMILY Cyclophilin-like 155 380 IPR029000 -
Vra7g1997 381 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 162 340 IPR002130 GO:0000413|GO:0003755
Vra7g1997 381 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 161 379 IPR002130 GO:0000413|GO:0003755
Vra7g1997 381 Gene3D - 148 381 IPR029000 -
Vra7g1997 381 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 4 381 IPR044185 -
Vra7g1997 381 Coils Coil 111 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1997 Vra-Chr7 39473919 39475704 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1997 K03768 - gmx:100800469 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1997 7 39473919 39475704 Vra7g1997 7 39473919 39475704 ECH