Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1996 ATGGTGCAAGATTCTGAAAAGAGATTCCATTCCATCATGGACAAGCTATTCCATCCTCCCAAACCCCCTTCCTCCTCCAGTTCTTCTGGAGTGCAGTTATCAGGGAGTAAGAAACGTCCTTACCCGTCAGGGGGGATTGAGTTGAATCGGAGGGGGGATGTTGCTGAGGGACAGCAGTCCTCCTCGGCGGCGTCCACGGCACTGCAGGGACCACTCTGCCGACCGTGGGATCGTGGTGACTTTATGAGGAGATTAGCTACATTCAAATCTATGTCGTGGTTTGCTAAACCAAAGGTAGTGAGTGCAGTAAATTGTGCTAGTAGAGGTTGGATCAATGTGGATATTGACACTATAGCCTGTGAAGCATGTGGAGCACGTCTTCTTTTCTCTACACCAGCATCTTGGAATCAGCAACAGGTGGAGAAGGCGGCATTGGTATTTAGCTTAAAGTTGGATAATGGACATAAATTACTTTGCCCATGGATTGATAATGCCTGCAGTGAAACACTGGCACGATTTCCTCCTACAACTCCAGAGATATTAGTTGAAAATTTCAGAGAACACTGTTTTGCACTCTTGCAACTATCTGCTCTTCCACGAATTTCATCTTCTGCTATAGCCTACATCCAAAGCCAAAGTCCACTTCTGGAAGACTTTCTTGGGAAATCTTTGATGCTGGAGTGTGGAAATGGATCTACTGAAAATTCTGGGAGTGTGGATTTTAATAGTCAGGAGGAACTGAAATTGTATTATCAGGCTCAAAAGCTTATAAGTTTATGTGGTTGGAAACTTCGTCCTCTACCTTATGTAGTTGAGTGTAAGGATATATCAGAGCAGTCTCTTAAAAATGCAACTACTCTTGCGATTCATTCTGCTGGCACTGATGAAAATAAAACCGATGAAAGTTCTATGGTTTCTATTGGGGAACAACAAGTGGATCCCAATTCTGCAGTATTGGATTGCACCCTATGTGGGGCCACTATTGGATTGTGGGCATTCTGTACAATTCCTCGGCCAGTGGAATCATTCAGACTAGTGGGATATGCTGAAGTGAATGGTGAAAGTGCTTTTGCGGTCCACAATTTACTGAATACAGATGATCTTGAAGATAGACAGGGTTTCATGCCTGATGTTACAATTTCATCAAAAGATACTTCTTCAAGTCTAAATATGACAATTGCAGGGGGTCCTCCCCCAACAAAGCAAAACTTTAAAGCAATAATATCTCTGCCTGTTATTGGTCAGAATTTATGGGCTCGTCTTTCTTATGATTCTAATTTTAGGGATCATGCTTTTGTTAACAAAGGTGGTGATGAATCAAATTTACAGGAGGAAACTGGCAATATCATTAATGCTTCTATTGGACAACTTGTTCCCCTGACATCTGAAACCAGGGAGACAGCAGATTATGAAACTGGTTCTCAAGCAAGGATCTGTGATTCAGATATTATTGTGGGCACCGATATTGCAGGACAATCGTTTTCTCTTAAGGATAAGATGCCTGTACACACAGATACTGATAAATTGAATAGTTCAGCTGCAGGATACTGTAGTAGTTCTCAGAAAGACTCTACAGAAGGTGAAGCACTTTCTGTTTCACGTAAGACTTCAGATGGCGTAGTTGGTAGTGACAGAGAAGACAATATTGATAGTGAAGATGTACCTTCTAGTTCAGAGAAATCTAAGAACCCAGCACTTTCTGATAAAGCTATGGAATTTGATCCAATCCGGCAGCACAGACACTTCTGCCCCTGGATTGCATCAATAAATGGCGGGGAACCTGGGTGGAAACAGACATTATCTGCTCTGTATCATCAGAAAAATCAGTTGCCGCATTCACCAAATAGATCTCCCTCATCTCTTCCCATTGTTAAGGTGGATGATCCCGTGGGTTCAATTAGAAAGCTTTTCATGTCTCCACCAACGAAGAGAATGAAGTCCACTCATATTATAGGGCAAAATACTTAA 1968 0.4228 MVQDSEKRFHSIMDKLFHPPKPPSSSSSSGVQLSGSKKRPYPSGGIELNRRGDVAEGQQSSSAASTALQGPLCRPWDRGDFMRRLATFKSMSWFAKPKVVSAVNCASRGWINVDIDTIACEACGARLLFSTPASWNQQQVEKAALVFSLKLDNGHKLLCPWIDNACSETLARFPPTTPEILVENFREHCFALLQLSALPRISSSAIAYIQSQSPLLEDFLGKSLMLECGNGSTENSGSVDFNSQEELKLYYQAQKLISLCGWKLRPLPYVVECKDISEQSLKNATTLAIHSAGTDENKTDESSMVSIGEQQVDPNSAVLDCTLCGATIGLWAFCTIPRPVESFRLVGYAEVNGESAFAVHNLLNTDDLEDRQGFMPDVTISSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLWARLSYDSNFRDHAFVNKGGDESNLQEETGNIINASIGQLVPLTSETRETADYETGSQARICDSDIIVGTDIAGQSFSLKDKMPVHTDTDKLNSSAAGYCSSSQKDSTEGEALSVSRKTSDGVVGSDREDNIDSEDVPSSSEKSKNPALSDKAMEFDPIRQHRHFCPWIASINGGEPGWKQTLSALYHQKNQLPHSPNRSPSSLPIVKVDDPVGSIRKLFMSPPTKRMKSTHIIGQNT* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1996 655 MobiDBLite consensus disorder prediction 507 568 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 1 15 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 539 557 - -
Vra7g1996 655 Pfam C3HC zinc finger-like 75 198 IPR012935 GO:0008270
Vra7g1996 655 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 645 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 21 36 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 1 71 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 507 538 - -
Vra7g1996 655 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 645 - -
Vra7g1996 655 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1996 Vra-Chr7 39467979 39474021 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1996 - - gmx:100799942 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1996 7 39467979 39474021 Vra7g1996 7 39467979 39474021 ECH