Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1992 ATGCCGGTTTCAACACGGTCTCAGATATGCGGGGAAGCGGAACCGAACCCATCGACGGCGACACGGCTGAGAAACCCACACCATGGGCTGAAGGAGAAGCTCAGAACGCTGACCCTTTTGTACGAGCAGCAGAAGCAAGCCTCGGTGTCTCTCAAGAACGCGTCTTTCAGGTTCCCTGAGAAGACAGTCATGCGAGAGAACGCAATGCCCAACACCGTCGTCACAAGAACCTTCGTGCTCCCCCAACCTCCCTCAAATGACGATGATGCCAAGGAAAACGCCATCATAGGCGCAGATCGCATTGTGGGGTTTTCGTGTCCCAGAAAAACGACAACAGATAATAATGTTTCCGTTTCTTGTTCTGCCACGGTGGCGCGGAAGCTCTCGATGCAGGAACCGGAGAGAGTGGATGCGGTTTCAGAGAAGCAAGGGAAAGTGGGAAGCAGGATAATGGTTTTCGTGAGGTTGAGACCGATGAATAAGAAGGAGAAGGAATCGGGTTCACGGTGCTGCGTCAGAGTTGTTAATCGCCGTGACGTTTACCTCACAGAATTTGCCAACGAAAACGATTATCTCAGACTTAATAGGCTTCGAGGACGCCACTTTACCTTCGATGCTGCGTTTCCAGATTCCGCTTCTCAGCAAGAAGTTTATTCCACATCGACTTCAGAGCTTGTTGAAGCGGTTTTGCAAGGGAGGAATGGGTCGGTTTTTTGTTATGGTGCAACAGGAGCTGGGAAGACTTACACAATGCTTGGGACGGTGGAGAATCCTGGGGTTATGGTTTTGGCTATTAAGGATCTTTTCAGTAAAATCAGGCAGCGGAGCTGTGATGGAAACCATGTTGTTCATCTGTCCTATCTTGAGGTTTATAACGAAACTGTTAGGGATTTGCTTTCACCTGGAAGACCTCTGGTTCTTAGAGAAGATAAACAGGGGATTGTGGCAGCAGGTCTTACACAATATAGTGCGTATTCAACTGATGAAGTGATGGCATTGCTTCAACAAGGAAATCAGAACCGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCCCGTTCCCATGCAATTTTGCAGGTCGTGGTGGAATACCGAGTTAGAGATGCCGCAATGAATGTTATTAACCGAGTGGGTAAGCTCTCATTAATTGATCTTGCAGGGTCTGAGAGAGCTCTCGCTACGGATCAAAGAACACTTAGATCTCTTGAGGGTGCCAATATAAACCGGTCTCTTCTTGCACTAAGCAGCTGTATTAATGCTCTAGTTGAAGGCAAGAAACATATCCCATACAGAAACTCAAAACTCACTCAGCTTCTCAAGGATTCACTAGGAGGAGCTTGTAACACAGTCATGATTGCAAACATAAGTCCAAGTAACTTCTCATTTGGTGAAACTCAGAATACAGTTCATTGGGCTGATAGAGCCAAGGAGATTCGACTAAAGGTAACCGATGCAAATGAGGATCAATTGCCAGAGCCTGAGATAGAATCTGACCAAACCAAGCTGGTACTTGAGCTGCAAAAGGAGAATCGTGAGTTAAGAATACAACTAACACAACATCAGCAGAAGATGTTGACTCTCGAAGCACAATCCTTAGCTTCGCATTCCTCCCCAACACTACCTTCAGCCGAACGTCTATCCACTCCAACTTCTGCCCAACCAGTTGAAAAACGAAGGAGTAGATCCTCATTCTTGGCGGGAACTTGTTTCACTCCAGAAACCAAGAAGAAGGGAGCTGAACTAGCCATCAAGACACTTCAACGAACTGTAAAAACACTAGAGGCAGAGATTGAGAGAATGAAGAAGGATCACAAATTGCAGCTAAAGCAAAAAGATGATATTATCCGAGAGCTTTCACAAAACGGTGTTAGACAAACATTAACAGCTGGGGAAACGGGGAAGGGAGTGGTGACCAGGGCTAGCCTACGGCCAAAGGAACAAAACAATAGTGAGATAAAGAGTCCAAGTCAACGTTTTAGATCACCTGCACCCACTGCCAAGAAACGAACGTTTTGGGACATAACAACAAATAATAGTCCATCGGTTACTACATTAAATGGTCGAAAAACTAGAAGTCATGTCCTTGCTGAACCTACGGCTCCTCCTCCATCCATGCTTCTCCAGCCTGGTTTTGCTCGTCAAAAAGCCAATATTTAA 2160 0.4616 MPVSTRSQICGEAEPNPSTATRLRNPHHGLKEKLRTLTLLYEQQKQASVSLKNASFRFPEKTVMRENAMPNTVVTRTFVLPQPPSNDDDAKENAIIGADRIVGFSCPRKTTTDNNVSVSCSATVARKLSMQEPERVDAVSEKQGKVGSRIMVFVRLRPMNKKEKESGSRCCVRVVNRRDVYLTEFANENDYLRLNRLRGRHFTFDAAFPDSASQQEVYSTSTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVENPGVMVLAIKDLFSKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYSAYSTDEVMALLQQGNQNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNVINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPSNFSFGETQNTVHWADRAKEIRLKVTDANEDQLPEPEIESDQTKLVLELQKENRELRIQLTQHQQKMLTLEAQSLASHSSPTLPSAERLSTPTSAQPVEKRRSRSSFLAGTCFTPETKKKGAELAIKTLQRTVKTLEAEIERMKKDHKLQLKQKDDIIRELSQNGVRQTLTAGETGKGVVTRASLRPKEQNNSEIKSPSQRFRSPAPTAKKRTFWDITTNNSPSVTTLNGRKTRSHVLAEPTAPPPSMLLQPGFARQKANI* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1992 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 524 IPR027417 -
Vra7g1992 719 MobiDBLite consensus disorder prediction 643 664 - -
Vra7g1992 719 MobiDBLite consensus disorder prediction 641 719 - -
Vra7g1992 719 Coils Coil 504 531 - -
Vra7g1992 719 MobiDBLite consensus disorder prediction 671 691 - -
Vra7g1992 719 ProSitePatterns Kinesin motor domain signature. 379 390 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vra7g1992 719 Coils Coil 577 622 - -
Vra7g1992 719 MobiDBLite consensus disorder prediction 1 23 - -
Vra7g1992 719 ProSiteProfiles Kinesin motor domain profile. 149 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 MobiDBLite consensus disorder prediction 1 24 - -
Vra7g1992 719 PRINTS Kinesin heavy chain signature 232 253 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 PRINTS Kinesin heavy chain signature 346 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 PRINTS Kinesin heavy chain signature 380 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 PRINTS Kinesin heavy chain signature 429 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 Gene3D Kinesin motor domain 141 485 IPR036961 -
Vra7g1992 719 PANTHER KINESIN-LIKE PROTEIN 131 712 - -
Vra7g1992 719 PANTHER KINESIN-RELATED 131 712 IPR027640 GO:0003777|GO:0007018
Vra7g1992 719 Pfam Kinesin motor domain 155 479 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vra7g1992 719 MobiDBLite consensus disorder prediction 532 561 - -
Vra7g1992 719 SMART kinesin_4 147 487 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1992 Vra-Chr7 39438201 39442642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1992 150 526 Miscellaneous Gene Families AT2G21380 36.842 1.79e-59 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1992 K10401 - gmx:100798358 1223.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1992 7 39438201 39442642 Vra7g1992 7 39438201 39442642 ECH