Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1980 ATGTTCCGCATTAGCAACACCGTTGTCGGCGCGCTCAACATTCTCTCCTTGCTCCTGGGCGTGGCCGCCGTGGCCTCCTCCGTTTACATCCACATCCGCGGCGGCTCCGACTGCCAGAAGGTCCTGCAGGTGCCGCTTCTAGTCGGCGGCATCTTCGTTGTGCTCGTCTCCGCCTTGGGAATCGTGGGGTCGCTGTACCGCGTCAACACGGCGCTCTACGCCTATCTCTTCGTCACGTTCGCGCTCATCTTGGGCCTCGCCTTCTTCACCGTCTTCACGCTATTCGTGACGAACAGGAAGGTGGGGCAGCAGGTTTCCGGCAAGGGCTACGGCGAGTACAGGGTGGCCGATTTCTCGCACTGGCTGCAGCGCTACGTCGTCAACAACAAGAACTGGGACGAGGTGAAGAGTTGCTTGATGGACGCGCACGTGTGTCAGAACCTCGCCATCAACGGTGGCCGCAACAACGACTTCCTCATTTTCAAACACCTATCAACTACGCAGTCTGGTTGTTGTAAACCACCAGCGTATTGTGGGTTCATAATGAAGAATGGTACGTTCTGGGAAGTGCCAAAAAAGGGTCCAGCAGTGAATAATTCTGACTGCAGCACTTGGAATAACAGAGAAGACAAACTGTGCTACGATTGCAATTCATGCAAGGGAGGGGTTTTGGCTAACATAAGGAACCAATGGAGACGTCTCACTGTATTCAACGCATGCGTGCTTTTGGTCGTCACTGCCATATATGCCTTGGGCTGCTATGCCATCAAGAACAACAGATTCGATTCACAGTGCAACCACCCCAAAACACCATCTCCTTGA 822 0.5401 MFRISNTVVGALNILSLLLGVAAVASSVYIHIRGGSDCQKVLQVPLLVGGIFVVLVSALGIVGSLYRVNTALYAYLFVTFALILGLAFFTVFTLFVTNRKVGQQVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSCLMDAHVCQNLAINGGRNNDFLIFKHLSTTQSGCCKPPAYCGFIMKNGTFWEVPKKGPAVNNSDCSTWNNREDKLCYDCNSCKGGVLANIRNQWRRLTVFNACVLLVVTAIYALGCYAIKNNRFDSQCNHPKTPSP* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1980 273 PANTHER TETRASPANIN-8-RELATED 1 264 IPR044991 GO:0009734|GO:0016021
Vra7g1980 273 Pfam Tetraspanin family 6 248 IPR018499 GO:0016021
Vra7g1980 273 PANTHER TETRASPANIN-8 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1980 Vra-Chr7 39338106 39339628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1980 1 260 Miscellaneous Gene Families AT1G18520 45.489 8.70e-83 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1980 - - gmx:100815322 496.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1980 7 39338106 39339628 Vra7g1980 7 39338106 39339628 ECH