Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1968 ATGGAGCTGTGGAACAGAGCCCGAAGCTTTGCGGAAGAAGCAGCGAAACGATCGAATGATCTGTCCTTGGGAGCTTCCAAATTGAGCGATATCATTACAGAGACCACCAAAGAGATAGCGGCACAAGCTTCCAAGCACTTGACCCAACCTTCGCTCACAAACGACGTCGATCTCCACCGTTTTGGCATCACCGAAGAGTTGAGAGAATTCGTCAAAGGGATCACCATCACTACCTTTGAACATTTCCCCCTTGAAGATGATACGGAATTTTCTGATGTTCCTGCGATTTCAAATGTCAGGCAGGATTTAACTGATTGGCAGGAAAAACATGCCGGTCTTGTTCTTTCTACCGTCAAGGAGATTTCTCGATTGAGGTATGAACTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATACTGCACCCTATGAGAATAAGTACATGGAAGATGAAAAACTAAAATCTTCTGAACAAGGAAAATATCGCATAGTCACGATGAAACCATTAAATGCTGAATTGATCTGTAACCAAGAGGCGCAGGAAATATCTAAAAAGGACAATTTATCAACTTCAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGAAGGAAACAGTGATGATGAGCCCGATGATGGCGATGGAAGATACAATGATGATTTGGACAAATTGATGGATAATTCGGATGATGAGAAAGGGAAATGA 735 0.4177 MELWNRARSFAEEAAKRSNDLSLGASKLSDIITETTKEIAAQASKHLTQPSLTNDVDLHRFGITEELREFVKGITITTFEHFPLEDDTEFSDVPAISNVRQDLTDWQEKHAGLVLSTVKEISRLRYELCPRVMKERKFWRIYFILVNNHTAPYENKYMEDEKLKSSEQGKYRIVTMKPLNAELICNQEAQEISKKDNLSTSTEQDLDVFLLGEGNSDDEPDDGDGRYNDDLDKLMDNSDDEKGK* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1968 244 MobiDBLite consensus disorder prediction 226 244 - -
Vra7g1968 244 SUPERFAMILY BSD domain-like 62 154 IPR035925 -
Vra7g1968 244 PANTHER BSD DOMAIN PROTEIN 1 47 - -
Vra7g1968 244 PANTHER BSD DOMAIN PROTEIN 53 240 - -
Vra7g1968 244 SMART wurzfinal6 98 150 IPR005607 -
Vra7g1968 244 Gene3D BSD domain 77 161 IPR035925 -
Vra7g1968 244 ProSiteProfiles BSD domain profile. 98 150 IPR005607 -
Vra7g1968 244 MobiDBLite consensus disorder prediction 209 244 - -
Vra7g1968 244 PANTHER BSD DOMAIN-CONTAINING PROTEIN 53 240 - -
Vra7g1968 244 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 47 - -
Vra7g1968 244 Pfam BSD domain 104 149 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1968 Vra-Chr7 39152422 39165992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1968 3 220 EF-hand Containing Proteins AT1G69030 39.583 5.15e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1968 - - gmx:100527562 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1968 7 39152422 39165992 Vra7g1968 7 39152422 39165992 ECH