Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1965 ATGGGTTGGGCCATAGCTCTACACGGCGGCGCCGGTGACATCCCCCTTTCGCTACCACCGGAGCGCCGTCAGCCACGAGAGGAAGCCCTCCGCCACTGCCTCCATATCGGCGTCGAAGGTCTCAAAGCCAAACTGCCTCCTCTCGACGTGGTTGAGCGCGTCGTTCGGGAGTTGGAGAACATTCCGCAGTTCAACGCGGGGAAGGGATCTGTGCTCACTTCCAAAGGCACCGTCGAAATGGAAGCTTCAATCATGGACGGCACCACTATGAATTGCGGAGCCGTTTCTGGCCTCACTACGGTTGTCAACGCCGTCTCTCTCGCTCGATTGGTCATGGAGAAGACGCCTCACATTTATCTAGCTTTCGATGGAGCAGAGGAATTTGCAAGACAACAAGGCGTTGAGACTCTCCATTCAAGCCATTTTATCACCGCAGAAAACATTGAAAGGCTAAAGCAGGCAATAGAAGCCAATAGGGTCCAGATTGACTATACCCAACCTATCCAAAATGATACTAAGAAAGAAACAGCAATTGCTAATGGTGATAGTCAAATTGGAACTGTTGGGTGTGTGGCTGTTGATGGTAATGGAAATTTAGCTTCTGCAACATCTACTGGTGGACTAGTGAACAAAATGGTTGGCCGAATTGGTGACACACCGGTCATAGGTGCTGGGACCTATGCTGATACACGTTGTGCGGTTTCGGCAACAGGCAAAGGTGAAGCAATAATACGAGGAACTGTGGCAAGAGATGTCGCTGCTCTAATGGAGTTTAAGGGTCTTTCTCTCGAGGAAGCTGCGACTTGTGTTGTGCATGAACGCACGCCAAAAGGCACTGTTGGTTTGGTTGCTGTGTCTGCCAAAGGAGAAGTTGCAATGCCTTTTAATACAACAGGCATGTTCAGAGCTTGTGCTACTGAAGATGGGTATTCTGAGATTTCAATTTGGCCTGCTGCCACCAAATTTGAGTGA 972 0.499 MGWAIALHGGAGDIPLSLPPERRQPREEALRHCLHIGVEGLKAKLPPLDVVERVVRELENIPQFNAGKGSVLTSKGTVEMEASIMDGTTMNCGAVSGLTTVVNAVSLARLVMEKTPHIYLAFDGAEEFARQQGVETLHSSHFITAENIERLKQAIEANRVQIDYTQPIQNDTKKETAIANGDSQIGTVGCVAVDGNGNLASATSTGGLVNKMVGRIGDTPVIGAGTYADTRCAVSATGKGEAIIRGTVARDVAALMEFKGLSLEEAATCVVHERTPKGTVGLVAVSAKGEVAMPFNTTGMFRACATEDGYSEISIWPAATKFE* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1965 323 Pfam Asparaginase 3 316 IPR000246 GO:0016787
Vra7g1965 323 CDD Asparaginase_2 4 309 - -
Vra7g1965 323 Gene3D (Glycosyl)asparaginase 187 319 - -
Vra7g1965 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 316 IPR029055 -
Vra7g1965 323 PANTHER ISOASPARTYL PEPTIDASE/L-ASPARAGINASE 1 316 - -
Vra7g1965 323 PANTHER L-ASPARAGINASE 1 316 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1965 Vra-Chr7 39122915 39124690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1965 5 294 Miscellaneous Gene Families AT4G00590 25.688 8.15e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1965 K13051 - gmx:100799400 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1965 7 39122915 39124690 Vra7g1965 7 39122915 39124690 ECH