Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1943 ATGAGAGAAGTGAATCCAGCCAGCCAACCACAGTACTTCCCAGTCACCAGTTTCGATCTGAGTCAGTGTGACTATCTGTCTTTCTTTCTTCTCCTCTGCAATCTTGCAATGGCACAAACACAAATCCAGAGACCCTGTTCAAGCATCATCGATTCTCTGGGTGAAGAAATCGTGAGAATCATCGCACCCGTTTCGATATGCATGTTCTTGGTCGTTATATTGGTGTCAATTCTGAACACGGATTCTTCTCTCTTCGACGCATCGATGAGCATGGTCACCATGGCCTACACCGAGACAACCTCGGACTCCACCTGGGACAAATTCCTCGGTGCCCTTTTGAACTCTCTGGCTTTCGTCCTCCTCGTCACCTTCGCAACCTTCATCCTGGTTCTCCTCTTCTACTTCCGATGCACCAGGTTCTTAAAACTCTATATGGCTTTCTCCACTTTCATCGTGCTGGGGTTCCTCGGCGGTGAAGTCTCGCTGTTCTTGATCCAACAGTTTAACACCCCCGTTGATTGCATTACGTTTTTCCTCTTGCTATGTAATTTCGCCGTTGTGGGTGTTTTGACCGTGTTTATGTCAAAAATGGCAATTTTTGTGACGCAGGGGTATTTGGTTGTTATTGGAATATTGATTGCATATTCGTTTACTATGTTGCCTGAGTGGACCACCTGGGCCTTGCTTGTTGCTATGGCGCTGTATGATGTTGCTGCAGTTTTGTTACCAATTGGGCCGTTGAGGCTTTTGGTGGAGCTTGCAATATCAAGGGATGAGGAAATTCCCGCATTGGTTTATGAGGCTAGACCAGTGAACCATGGTAATTTGAGTCCTAGGGATCTTGTGCAGAGGAGGCGGTTATGGAGAGAAAGGAGGGTTGATAATTCAAATCTCCAAACTGATTCCAACTCAGCGCTGGGTCATGGATCCAGTGTTGAATTTCCCTCTGGTTCTGAAGGAAACCCCAGCAATAACTTAAACATGGTTAGGGAGAATACCTCTAGAAATGCAAATCTAACAGCTAATAGTTCTGTTGGCTCTTATGGTTGCATAAGTTTGGTGAATGCAGAAGAGGAACCAGTGCGCGTTCATGAGACTGATTCAGAGCTTTCTGCTCCCTTGATTGATCGTGGAATGAATGTCCAGCATGGTAGGGGGGAAGATGCTGTGCCAAGTGAGAATTTGATGCTAGAAGGAATTGGATTGGGTTCTTCTGGTTCAATCAAGTTAGGGCTGGGAGATTTTATCTTCTACAGTGTTTTGGTTGGCAGGGCGGCAATGTATGATTTTATGACGGTGTATGCATGTTATCTTGCTATCATTGCGGGTCTTGGCATAACTTTGATCCTTTTGGCTTTATATCAGAAGGCTTTGCCTGCTCTTCCTGTGTCAATAGCACTGGGTGTGTTGTTTTATTTCTTGACAAGGCTCTTACTTGAAGTATTTGTAGTACAATGTTCTTTAAATCTCCTGTTGTTCTAA 1482 0.4494 MREVNPASQPQYFPVTSFDLSQCDYLSFFLLLCNLAMAQTQIQRPCSSIIDSLGEEIVRIIAPVSICMFLVVILVSILNTDSSLFDASMSMVTMAYTETTSDSTWDKFLGALLNSLAFVLLVTFATFILVLLFYFRCTRFLKLYMAFSTFIVLGFLGGEVSLFLIQQFNTPVDCITFFLLLCNFAVVGVLTVFMSKMAIFVTQGYLVVIGILIAYSFTMLPEWTTWALLVAMALYDVAAVLLPIGPLRLLVELAISRDEEIPALVYEARPVNHGNLSPRDLVQRRRLWRERRVDNSNLQTDSNSALGHGSSVEFPSGSEGNPSNNLNMVRENTSRNANLTANSSVGSYGCISLVNAEEEPVRVHETDSELSAPLIDRGMNVQHGRGEDAVPSENLMLEGIGLGSSGSIKLGLGDFIFYSVLVGRAAMYDFMTVYACYLAIIAGLGITLILLALYQKALPALPVSIALGVLFYFLTRLLLEVFVVQCSLNLLLF* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1943 493 Pfam Presenilin 54 483 IPR001108 GO:0004190|GO:0016021|GO:0016485
Vra7g1943 493 PRINTS Presenilin family signature 61 71 IPR001108 GO:0004190|GO:0016021|GO:0016485
Vra7g1943 493 PRINTS Presenilin family signature 219 226 IPR001108 GO:0004190|GO:0016021|GO:0016485
Vra7g1943 493 PRINTS Presenilin family signature 236 253 IPR001108 GO:0004190|GO:0016021|GO:0016485
Vra7g1943 493 PANTHER PRESENILIN 47 493 - -
Vra7g1943 493 SMART psh_8 109 479 IPR006639 GO:0004190|GO:0016021
Vra7g1943 493 PANTHER PRESENILIN 47 493 IPR001108 GO:0004190|GO:0016021|GO:0016485
Vra7g1943 493 MobiDBLite consensus disorder prediction 298 329 - -
Vra7g1943 493 Gene3D Presenilin 401 485 IPR042524 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1943 43 493 Miscellaneous Gene Families AT2G29900 59.071 5.97e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1943 K04505 - gmx:100799643 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1943 7 38922780 38925044 Vra7g1943 7 38922780 38925044 ECH