Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1915 ATGAGTTCTTCTCCGCCTCGTTCTCGTGGCGACGGCGAGAAAAGGCCCAGGTTTTTCGACTCAAACGCCAAGGCCATCTGTTGGTCCAAGGCTGATATTGTCCCCGGCCGCCACCCTGAGAGGTGGCGCAAAGACGCCGCGGGTAACATTGTCTGCAAACGTTTCTACAACTGCATCGGCTGCCTCTGCTACGAGTACGATCACATCATCCCCTTCTCCAAAGGTGGTGAGTCTACAGCAGATAACTGTCAAATACTTCAATCAAGAGTTAACAGACTCAAATCGGACAAATATGACGTTGATTCTAATCAATTGAAAGACTACTCGTGTGAGGTTAATTTTACTGCAGATAAGGAGCTTGATATAATTGAGATGGCTGTTTACGGGGATGTGGTGCGGCCTGGAAATCAGTGTCGTTGCAGAACTATTGCTGAGAAGCTTGGCAAATTTAAACCAAAAGATGACAAAGATGCTTGTAAGTTGCCACAGGGATGA 495 0.4727 MSSSPPRSRGDGEKRPRFFDSNAKAICWSKADIVPGRHPERWRKDAAGNIVCKRFYNCIGCLCYEYDHIIPFSKGGESTADNCQILQSRVNRLKSDKYDVDSNQLKDYSCEVNFTADKELDIIEMAVYGDVVRPGNQCRCRTIAEKLGKFKPKDDKDACKLPQG* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1915 164 Pfam HNH endonuclease 65 96 IPR002711 GO:0003676|GO:0004519
Vra7g1915 164 CDD HNHc 53 95 IPR003615 -
Vra7g1915 164 PANTHER HNH ENDONUCLEASE 12 163 - -
Vra7g1915 164 Gene3D - 30 116 - -
Vra7g1915 164 PANTHER F6A14.21 PROTEIN 12 163 - -
Vra7g1915 164 SMART HNH_5 46 92 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1915 Vra-Chr7 38665045 38670224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1915 - - vra:106766777 332.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1915 7 38665045 38670224 Vra7g1915 7 38665045 38670224 ECH