Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1910 ATGGGGCAAGATAATCACCACAAGCGCAGCACCAGCGCCGGTTTACCCACCTCCAACGCCCGAGGCCGCGCCACCGGGATCCCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATACTATGCGGCTTTGTCACCATCCTCGTCCTCCGTGGCACCATCGGCGTCAATCTCGGCTCCTCCGATTCCGACGCCGTCAACCAGAACCTTATCGAGGAGACCAACCGCATCCTCGCCGAGATCCGATCTGACGCCGACCCCTCCGATCCCGACGACCAGCAACCCTTCAACCCCAACGCTACCTTCACCCTCGGTCCCAAAATCAATAATTGGGACGAAGAGCGCCAAAATTGGCTCACTCAAAACCCTGAATACCCTAATTTCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCATTACCTCTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCAAAGTTGCCTATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTTACTGATATGGTGTTTGAGCTTCCCATGTCTAAGTACGATGCTTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTCGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGCCAGTGGTCTTTGGATTTGCTTGATGAATGGGCTCCCATGGGTCCCAAGGGGCCGGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAGAATTCGTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGCTGTAAGCCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTCTATGGTTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTCACTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.5022 MGQDNHHKRSTSAGLPTSNARGRATGIPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDSDAVNQNLIEETNRILAEIRSDADPSDPDDQQPFNPNATFTLGPKINNWDEERQNWLTQNPEYPNFIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDEWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1910 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 8 439 - -
Vra7g1910 445 MobiDBLite consensus disorder prediction 1 19 - -
Vra7g1910 445 MobiDBLite consensus disorder prediction 1 27 - -
Vra7g1910 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016021|GO:0016757
Vra7g1910 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 8 439 IPR008630 GO:0016021|GO:0016757
Vra7g1910 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 136 283 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1910 Vra-Chr7 38592150 38593953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1910 10 437 Glycosyltransferase AT5G07720 79.770 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1910 K08238 - gmx:100819400 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1910 7 38592150 38593953 Vra7g1910 7 38592150 38593953 ECH