Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1907 ATGGGTTCTACCGCTGAAGACCGATCAGAGATTGTGTTCTTCGATGTGGAGACCAGCGTCCCCACTCGAACAGGTCAGGGATTTGCCATTCTCGAATTCGGAGCCATTTTGGTTTGCCCCAAGACGCTCACGGAGCTCCGCAACTACTCCACCCTCATCCGTCCCCCCGTTCTCTCCGTCATCTCCCCCTTGTCCCAGCGCTGCAATGGCATCACCGCCGACGCCGTCGCCGCCGCGCCGACTTTTGCCGACATTGCTCACCTCGTCTACGACCTTCTTCACGGGAGGATTTGGGCGGGTCATAATATCATAAGGTTTGACTGTGTTCGGATTAGAGATGCTTTTGCTGAGATTAATCAGCCGCCACCTGAACCTAAGGGAACCATTGACTCTCTAGTTTTGTTGACTCAGAAGTTTGGAAGAAGAGCTGGTGACATGAAGATGGCTACTCTTGCTACTTATTTTGGACTTGGACGCCAGACACATAGGAGCTTAGATGATGTTCGGATGAATCTTGAAGTCCTCAAGTACTGTGCGACTGTTCTATTCTTGGAGTCAAGTCTCCCGGATATATTCACTGCAAACAGTTGGGTTTCTCCAAAGACTACGACAAGAAGCCGCAGTAATGGGAAATCTCCATCACAGGGGGGCTTATTAAACATTAATGGGGTTTCTGTATCATCATCTCCTGCTGTTGAATCCAAAGACAAAAGTCATCCTATAATTTCTTTAGCAATGAGCGGCCAAGAAGGGGATGCCCTTAATAATGCAGATCCTAATATAGTTCAATCGGATCCTTTTGATTTTGGTACTCTGGAGGAAGAAATAAATAGAGAACCCATTAAGTCAGATGTTTCCATGGTGGAAAAACCCATGCAGGAGTCACCTGATCTGGCTTCCTCGTCTTCTGTGTTTCAGCCTTGCAGCAGCTCTATTCTTGTTTTAGAACCTGATAGAATATGTGTCCCTTCTATTGATGCATCTCTTGTTCCATCTTTTCAAGGAAGTCAAAGGATAGAATTACTGCATGAAGGTTTTCCATTCCAACTTTATTGTACTGATTTGATAGTGCGGTTTGGAATAAGCACGAAATTTTTTGATAATGCTGGCCGGCCACGATTGAGTTTTGTGGTTGATTCATCACCAAGTCTATGTAATGTTCTTGATGCATGTGACGACGTTGCTAAGAAGTTAACGGTGGATTCTGGCAGCAGCTCTGATTGGAGGCCCGTTGTCATTAGGAAAGAAGGTTTCTTCAACTATCCTACTGTCAGATTGCACATACCTACAGCTGTAGTCGCAGACGTTGCCATTTATGCCACGGAAATATATCAGAAAGAGTCTTCGGGAGCAGTGCAAAGACTTCTCTTCAGTAAGTTTGATGCTGCAGAACTTGGTTCCTTGTTCATGCCTGGAACATTTGTTGATGCCTTCTTCACTTTAGATCCCTATGACTATCAGCAGAATGCAGGGATTAAATTAGTTGCTAAAAAATTGATCATTCATTGTAAATAG 1515 0.4495 MGSTAEDRSEIVFFDVETSVPTRTGQGFAILEFGAILVCPKTLTELRNYSTLIRPPVLSVISPLSQRCNGITADAVAAAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLPDIFTANSWVSPKTTTRSRSNGKSPSQGGLLNINGVSVSSSPAVESKDKSHPIISLAMSGQEGDALNNADPNIVQSDPFDFGTLEEEINREPIKSDVSMVEKPMQESPDLASSSSVFQPCSSSILVLEPDRICVPSIDASLVPSFQGSQRIELLHEGFPFQLYCTDLIVRFGISTKFFDNAGRPRLSFVVDSSPSLCNVLDACDDVAKKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVADVAIYATEIYQKESSGAVQRLLFSKFDAAELGSLFMPGTFVDAFFTLDPYDYQQNAGIKLVAKKLIIHCK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1907 504 SUPERFAMILY Ribonuclease H-like 10 180 IPR012337 -
Vra7g1907 504 Pfam Exonuclease 12 175 IPR013520 -
Vra7g1907 504 PANTHER DNA POLYMERASE III SUBUNIT EPSILON 5 503 - -
Vra7g1907 504 MobiDBLite consensus disorder prediction 200 221 - -
Vra7g1907 504 CDD DEDDh 12 176 - -
Vra7g1907 504 Gene3D - 4 182 IPR036397 GO:0003676
Vra7g1907 504 PANTHER PROTEIN NEN3 5 503 - -
Vra7g1907 504 SMART exoiiiendus 10 184 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1907 Vra-Chr7 38564727 38568725 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1907 - - ccaj:109808157 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1907 7 38564727 38568725 Vra7g1907 7 38564727 38568725 ECH