Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1904 ATGGCTGCAACTTCTTCCTTGTGTTCATCTACCCTCCAATCCCAAATCAATGGTCTCCACCTTCACAAAACCACTCTTTTTCATCCTCCTTCCCTCACTTTCTCCAGGAGGAAACTTTCAACCATCGTGAAGGCTTCATCTCGTGTTGACAAGTTTTCAAAAAGCGATATCATTGTTTCTCCATCCATTCTTTCTGCCAACTTTTCAAAATTGGGAGAGCAGGTGAAAGCAGTGGAGTTGGCTGGCTGTGATTGGATTCATGTTGATGTAATGGATGGACGCTTTGTCCCAAATATTACAATTGGACCTCTCGTGGTTGATGCATTGCGCCCTGTGACGGATCTTCCTTTGGATGTGCACCTGATGATTGTGGAGCCTGAACAAAGGGTGCCAGATTTTATCAAGGCAGGAGCTGATATTGTCAGTGTTCATTGTGAACAATCTTCCACCATCCATTTGCACCGTACAGTTAATCAAGTGAAAAGTCTGGGCGCCAAAGCTGGTGTTGTCTTAAACCCTGCAACTCCCTTAAGCACAATAGAATATGTCCTTGATGTGGTTGATTTAGTCTTAATCATGTCTGTAAACCCTGGCTTTGGTGGCCAGAGTTTTATCGAGAGTCAAGTAAAGAAAATTTCTGATTTGAGAAGACTGTGCGCAGAGAAGGGAGTAAATCCATGGATTGAAGTAGATGGTGGAGTTGGACCAGCAAATGCTTACAAGGTGATTGAGGCTGGAGCCAATGCACTGGTTGCTGGTTCTGCTGTATTTGGAGCTAAAGATTATGCTGAAGCTATAAGAGGAATCAAAACCAGCAAAAGACCTGAAGCAGTTGCTGTGTGA 843 0.4389 MAATSSLCSSTLQSQINGLHLHKTTLFHPPSLTFSRRKLSTIVKASSRVDKFSKSDIIVSPSILSANFSKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQVKSLGAKAGVVLNPATPLSTIEYVLDVVDLVLIMSVNPGFGGQSFIESQVKKISDLRRLCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKDYAEAIRGIKTSKRPEAVAV* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1904 280 SUPERFAMILY Ribulose-phoshate binding barrel 51 273 IPR011060 -
Vra7g1904 280 Gene3D Aldolase class I 47 276 IPR013785 -
Vra7g1904 280 TIGRFAM rpe: ribulose-phosphate 3-epimerase 59 270 IPR026019 GO:0004750|GO:0006098
Vra7g1904 280 Pfam Ribulose-phosphate 3 epimerase family 59 257 IPR000056 GO:0005975|GO:0016857
Vra7g1904 280 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 190 212 IPR000056 GO:0005975|GO:0016857
Vra7g1904 280 PANTHER - 16 267 - -
Vra7g1904 280 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 16 267 IPR000056 GO:0005975|GO:0016857
Vra7g1904 280 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 1. 86 100 IPR000056 GO:0005975|GO:0016857
Vra7g1904 280 CDD RPE 58 270 IPR000056 GO:0005975|GO:0016857
Vra7g1904 280 Hamap Ribulose-phosphate 3-epimerase [rpe]. 56 272 IPR026019 GO:0004750|GO:0006098
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1904 K01783 - gmx:100817791 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1904 7 38540475 38545507 Vra7g1904 7 38540475 38545507 ECH