Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1900 ATGAAGGGTAGTTATGGTACTGAGTCGAGTAGCAGAGAAGAAAGAAGAAGAAGGGCGAGGTCTTCGTCACCACTGAAGGACCGATCCAAAACCTCTTCGTCTAAGTTATCTTCTCCGTCCAAACGGAGCACATCACCCTCTGCCACTCTCCTCGACGTTGACCATGACGTATTCTCTCTATCTCATGATTATCCTAACCCTAACCCTCGGAGCTTCCCTCACAGCGTTAAGCAGAAATGCTGGGAAAAGGCAGACAAGGTCAAAGGACGAGACCCCGACCGCTGGCGCAGGGACGCCCTCGGCAATACTGTCTTTCGCAAGCTCGTAGGTTGCCCCGGTTGTCTCTGTCATGACTACGACCACATTCTTCCTTACTCTAAGGGGGGAGAAAGCACTCTGGAAAACTGTCAAGTATTACAAGCAACAGTTAATCGTTCAAAGGGTAACCGAACAGATATCTCCAAAGCTGAACTTATTCAAAAGAGTTCTTATTGCAGGGTTTCAGATCGTGATATGGATCTTCTTGAACTGTCGGCCTATGGGAATGTCCGGCGTGGACCCGATAATGGGGGATGTAGAATCCAATGA 588 0.4881 MKGSYGTESSSREERRRRARSSSPLKDRSKTSSSKLSSPSKRSTSPSATLLDVDHDVFSLSHDYPNPNPRSFPHSVKQKCWEKADKVKGRDPDRWRRDALGNTVFRKLVGCPGCLCHDYDHILPYSKGGESTLENCQVLQATVNRSKGNRTDISKAELIQKSSYCRVSDRDMDLLELSAYGNVRRGPDNGGCRIQ* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1900 195 CDD HNHc 104 148 IPR003615 -
Vra7g1900 195 MobiDBLite consensus disorder prediction 7 25 - -
Vra7g1900 195 PANTHER HNH ENDONUCLEASE 11 195 - -
Vra7g1900 195 Pfam HNH endonuclease 117 150 IPR002711 GO:0003676|GO:0004519
Vra7g1900 195 Gene3D - 75 169 - -
Vra7g1900 195 MobiDBLite consensus disorder prediction 26 49 - -
Vra7g1900 195 MobiDBLite consensus disorder prediction 1 49 - -
Vra7g1900 195 PANTHER HNH ENDONUCLEASE 11 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1900 Vra-Chr7 38494441 38496366 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1900 - - gmx:100500174 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1900 7 38494441 38496366 Vra7g1900 7 38494441 38496366 ECH