Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1707 ATGGCCAGTGGTAGGGGTGATAGAATGGTTGGAGGAAGAACGTCGGCAGGAACTCCAGTTCTACAACAGATAGTACCTAATTCTGGATGGACACAGGACTCTGCGGGCCATTACCTTCTGGTGGATCTTCCTGAATTCAGGAAGGAAGAGGTGAAGCTCCAAGTTGATAGCTATGGCCGTATTGTTGTAAAGGGAGAAAGGCAAATAAATGCGTGGAAACACGACCATTTTCGGCTGACTTTTCCTGCTCCACTGGACTCTGATATGGATAGGATAGCCGGAAAGTTTGACGGTGGAATCCTTTATGTCACTATCCCCAAGCAAGTAACGCAACATAGCAAAGTAAGTGAACTCGGGAAAGTTGGAAATGGCAAAGTTGAAAGGGCAGAAGAAAATGGTAGCCATCGACATGGAAATGGTGATGTTGACAGAGCAAAAGAAAACGATAGCCATCGGCGTGGAAATGGAGTTATAAGAACAGATAAAAATGATAGCCAAGAGCATGGAAATGGCAAAGTTGAAAGAGCAGAAGAAAATGATAGCAGTGCAAGTGAACATGACAAAGATACAGAGCAAGAAGTAAAAAGAAATGAAAATGAGCGCATCGAAGAATTTCCGGAACAAGTAATAAGGAAGTGGGAGGAAGAATCCATGTTAAGAGGCGCAGTTGATGTTTTGAGGGAAAACAAAGGAATTGTTGTAACAGCTGTTGTAGCCTTTTCCTTAGGGTTCTTGGTATATCGCAAATTCAATAGCAGTGTAAGTTAA 768 0.4284 MASGRGDRMVGGRTSAGTPVLQQIVPNSGWTQDSAGHYLLVDLPEFRKEEVKLQVDSYGRIVVKGERQINAWKHDHFRLTFPAPLDSDMDRIAGKFDGGILYVTIPKQVTQHSKVSELGKVGNGKVERAEENGSHRHGNGDVDRAKENDSHRRGNGVIRTDKNDSQEHGNGKVERAEENDSSASEHDKDTEQEVKRNENERIEEFPEQVIRKWEEESMLRGAVDVLRENKGIVVTAVVAFSLGFLVYRKFNSSVS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1707 255 Pfam Hsp20/alpha crystallin family 32 113 IPR002068 -
Vra7g1707 255 SUPERFAMILY HSP20-like chaperones 22 111 IPR008978 -
Vra7g1707 255 PANTHER HEAT SHOCK PROTEIN 26 8 252 IPR045045 -
Vra7g1707 255 Gene3D - 4 118 IPR008978 -
Vra7g1707 255 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 8 252 - -
Vra7g1707 255 MobiDBLite consensus disorder prediction 114 201 - -
Vra7g1707 255 CDD ACD_sHsps_p23-like 30 107 - -
Vra7g1707 255 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 124 IPR002068 -
Vra7g1707 255 MobiDBLite consensus disorder prediction 121 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1707 Vra-Chr7 35653821 35655285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1707 - - gmx:100527247 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1707 7 35653821 35655285 Vra7g1707 7 35653821 35655285 ECH