Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1705 ATGAGCACCAGTCCAGGGATATATTTTGATATTGGCAAGAAGGCTAAAGATGTTCTGCACAAGGATTATTCAAATCTATCACCAATTCACTTTCATTACCAGTTTATGGATTACAACGTCGACCTCTCTTGTCAATTAAATGAAATTCTACCTGGATTCAGGAGCCTTTTCAAATGCACCATACCTGATTCAGGGAAGGTAGAAGTACAACATTTGACTAACTACACTGGAATTACTGGATGCATTGGACTGGAAGGAAACTTAGAAAAAGGATATGATCCTGTTCTGAACTTGTCGGGTCTTGTGGGAACAAACATCTTGTCACTTGGAGCCAATGTTGCTTTAGACATACCAACAAGAACATTCAGTAATCTGAATGCTGGATTAAACCTCAACACTCCCTTCCTTGTTGCTTCCTTGACCACGCATGACAGTTTCGACATTCTGAAAGCCTCCTGTTATCACGAAGTGAACCCCCTAAGCAAAACCGCCATTGCAGCAGAGCTGAAGCATAGCTTGTCAATGGGGGAGACTAGTGCCACCATTGGTGCTCAGCATGCAATTCTTCCGGAAACGTTAGTAAAGGCTCGATTTGACACCTTTGGCAAGGCAGGTGCAGTTATTCAACAAGGGTTCTGGGAGAGGTTTTATGTGTCTATGGCTGGAGAAGTGGATTTTAAGACCACAGATAATAATTTACATCCCAAGGTTGGAGTCTCTGTGGCTTTAAGACCCTAG 738 0.4268 MSTSPGIYFDIGKKAKDVLHKDYSNLSPIHFHYQFMDYNVDLSCQLNEILPGFRSLFKCTIPDSGKVEVQHLTNYTGITGCIGLEGNLEKGYDPVLNLSGLVGTNILSLGANVALDIPTRTFSNLNAGLNLNTPFLVASLTTHDSFDILKASCYHEVNPLSKTAIAAELKHSLSMGETSATIGAQHAILPETLVKARFDTFGKAGAVIQQGFWERFYVSMAGEVDFKTTDNNLHPKVGVSVALRP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1705 245 Pfam Eukaryotic porin 36 234 IPR027246 GO:0005741|GO:0055085
Vra7g1705 245 PANTHER PORIN/VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 245 - -
Vra7g1705 245 Gene3D Porin 3 244 IPR023614 -
Vra7g1705 245 PANTHER VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL 1 245 IPR001925 GO:0005741|GO:0008308|GO:0098656
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1705 Vra-Chr7 35642618 35645013 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1705 K15040 - gmx:100787061 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0988 4 17018081 17021774 Vra7g1705 7 35642618 35645013 ECH
Vra7g1705 7 35642618 35645013 Vra7g1705 7 35642618 35645013 ECH