Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1697 ATGAACGTTGCTAGGAAAAGTGAGTCAGAGGTAGAGACTATGGAGAAAAATGAGGAGGCAGAGATTAAGTATAGAGGGTGGAAAGTGATGCCCTTTATCATTGGGAATGAAACTTTTGAGAAGCTGGGAACCATTGGTACCTTAGCCAATCTCTTAGTCTATCTCACAACTGTTTTCAACTTGGACAGTATCACAGCAACAAATATTATCAACATCTTCAATGGCAGTGCCAGTTTATCCACCTTGATTGGGGCTTTTCTCTGTGACACCTATTTTGGCCGCTACAAGACACTCGGATTCGCCACAATTGCTTCCTTTCTGGGGCTACTTATTATTCAACTAACAGCATGGATTAAGGAAATGCATCCAGCTCAGTGTGGAAAAGATAGCAGCATATGCAAAGGTCCAAACACAGGCCAAATGGCATTTCTGCTGTCTGCATTTGCATTTCTGATTGTGGGAGCTGCAGGGATCAGACCTTGTAACTTGGCATTTGGAGTTGATCAGTTCAACCCCAAGACTGAGTCAGGAAAAAAGGGAATAAACAGCTTCTTCAATTGGTACTTCTTTACCTTCACATTTGCTCAGATGATATCTCTATCACTCATTGTGTACGTACAAGCAAACGTGAGTTGGGCTCTGGGTCTGGGAATTCCTGCAGCTTTGATGCTCATCTCTTGCACACTCTTCTACATGGGAAGCAACTATTATGTCAAAGTTAAAACAAGTGGTCCAGCTCCACTAACAACCATAGTTCAAGCTATAGTTGTGGCTGCAAAGAAAAGAAGACTCAATCTATCACACTATCCCTTGGTTTCCCTCTTTGACTATGTTTCTCCTCACTCTATTAACTCCAAGCTTCCTCACACTTCTCAGTTCAGGTTCCTTGACAAAGCTGCTATCATAACCCCAGAAGATGGTATAAACCCTGACGGGTCAGCTTCTGATCCTTGGAATCTGTGCAGCATGCAGCAAGTGGAAGAGTTGAAATGTTTGATAAGAGTGATCCCCATTTGGGTTGCAGGAGTTTTCTTCTACGTTGCGATTGTCCAACAGAACACAATGTTGGTGTTCCAGGCCCTTCAAGCTGATAGACGCGTTCTCAACAGCAACTTCAAGATCCCAGCAGCTTCCTACACTATCTTCCAGATGCTGACCCTCACCCTCTGGTTACCAATCTATGACCGAATTATCGTGCCTTCACTCCAAAGGTTGACCAAAAAAGAGGGTGGCATCACAATTCTTCAAAGGATGGGCATTGGAATGTTTCTCTCTGCACTATGTGTATTTGTGTCTGGTGTGGTGGAAGAGAGGAGAAGGACTATGGCTTTGACCAATCCTATTGGAAGAGAACCAAGAAAAGGTGACATTTCTTCAATGCCAGCTCTGTGGTTTATTCCTCAGTTAGCACTGGCAGGACTGTCTGATGCATTTACCCTTGTGGGACAAGTTGAATTTTTCTACAAACAGTTCCCTGAGAACATGAAAAGCATTGCAGCCTCTCTTTTCTTCTGTGGTCTTGCAGGATCAAGTTATTTGAGTAGTTTTCTCATTTCTATCATCCATAAGGTCACAGCTAAATCTGCAACTGGGAATTGGTTACCTCAGGATCTCAACAAGGGGAGATTGGATTATTTTTATTACGTTATAACAGCTCTTCAAGTCTTCAATTTTTGTTACTTTCTACTGTGTGCCAAGTGGTATAAATACAAAGGGACTGCTACTACCAGCAGTACTCATGACCTTCAGCTAGATCAACTATCCAAACCATCTCAAAAGACTCTTAACACTGTCTAA 1797 0.4268 MNVARKSESEVETMEKNEEAEIKYRGWKVMPFIIGNETFEKLGTIGTLANLLVYLTTVFNLDSITATNIINIFNGSASLSTLIGAFLCDTYFGRYKTLGFATIASFLGLLIIQLTAWIKEMHPAQCGKDSSICKGPNTGQMAFLLSAFAFLIVGAAGIRPCNLAFGVDQFNPKTESGKKGINSFFNWYFFTFTFAQMISLSLIVYVQANVSWALGLGIPAALMLISCTLFYMGSNYYVKVKTSGPAPLTTIVQAIVVAAKKRRLNLSHYPLVSLFDYVSPHSINSKLPHTSQFRFLDKAAIITPEDGINPDGSASDPWNLCSMQQVEELKCLIRVIPIWVAGVFFYVAIVQQNTMLVFQALQADRRVLNSNFKIPAASYTIFQMLTLTLWLPIYDRIIVPSLQRLTKKEGGITILQRMGIGMFLSALCVFVSGVVEERRRTMALTNPIGREPRKGDISSMPALWFIPQLALAGLSDAFTLVGQVEFFYKQFPENMKSIAASLFFCGLAGSSYLSSFLISIIHKVTAKSATGNWLPQDLNKGRLDYFYYVITALQVFNFCYFLLCAKWYKYKGTATTSSTHDLQLDQLSKPSQKTLNTV* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1697 598 Gene3D MFS general substrate transporter like domains 2 576 IPR036259 -
Vra7g1697 598 CDD MFS_NPF1_2 30 568 - -
Vra7g1697 598 PANTHER PEPTIDE/NITRATE TRANSPORTER 15 579 - -
Vra7g1697 598 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1697 598 Pfam POT family 96 533 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra7g1697 598 SUPERFAMILY MFS general substrate transporter 19 569 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1697 Vra-Chr7 35573535 35576531 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1697 7 581 Organic Solute Cotransporters AT5G62680 58.377 0.0 729
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1697 - - gmx:100807382 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1697 7 35573535 35576531 Vra7g1697 7 35573535 35576531 ECH