Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra7g1646 ATGGTTAACTCCGAAGCAGTAAGAACTGCAGTTGGAATAATTGGAAATGTCATTTCTTTTGGTTTATTCATGTCACCAGTACCTACATTTATTTCGATATTTAAGGCAAAATCAGTACAAAATTTTAGGTCAGATCCATACATGGCAACCATATTGAATTGTGGAGTGTGGGCATTCTACGGACTGCCCTTCGTAACCAAAGATAACACTCTTGTCATCACAATTAATGGATTTGGATTCTTCCTTGAAATCTTCTACGCTCTCGTCTTCTTTATTTACTCAACCTGGAGCAAGAGGAGGAAGATCATGCTCATCTTCCTTGGTGAAATAATCTTCCTTGCGTTACTGGTGTTTTTGGTGATGACCTTTGTTCACACCCCCAACAGAAGAAAGGTGATTGTTGGACCTATCTGCATATTCTTCAACATCCTTATGTATTTTTCACCCTTGACTGTAATGACACGAGTGATTCGAACCAAGAGCGTGAAATACATGCCTTTCTTACTTTCATTCGCCAACTTCGCCAATGGAATTGTGTGGACAACCTATGCCTTGCTTAAGTGGGATCCATTCATCGTGATTCCAAATAGTTTGGGAACACTTTCTGGGTTGGTACAGCTCATCCTCTACGTTGTTTACTATCGAACAACCAACTGGGATGAAGACGACGAACCCTCTAGCATCGTATGA 690 0.4058 MVNSEAVRTAVGIIGNVISFGLFMSPVPTFISIFKAKSVQNFRSDPYMATILNCGVWAFYGLPFVTKDNTLVITINGFGFFLEIFYALVFFIYSTWSKRRKIMLIFLGEIIFLALLVFLVMTFVHTPNRRKVIVGPICIFFNILMYFSPLTVMTRVIRTKSVKYMPFLLSFANFANGIVWTTYALLKWDPFIVIPNSLGTLSGLVQLILYVVYYRTTNWDEDDEPSSIV* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra7g1646 229 PANTHER RAG1-ACTIVATING PROTEIN 1 5 226 - -
Vra7g1646 229 Gene3D - 7 100 - -
Vra7g1646 229 Gene3D - 131 224 - -
Vra7g1646 229 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET5 5 226 - -
Vra7g1646 229 Pfam Sugar efflux transporter for intercellular exchange 133 216 IPR004316 GO:0016021
Vra7g1646 229 Pfam Sugar efflux transporter for intercellular exchange 11 95 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra7g1646 Vra-Chr7 34978961 34980637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra7g1646 1 194 Miscellaneous Gene Families AT5G62850 55.670 9.18e-80 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra7g1646 K15382 - gmx:100810948 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1646 7 34978961 34980637 Vra7g1646 7 34978961 34980637 ECH